Candidatus Phycorickettsia trachydisci: phytr_1360
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Entry
phytr_1360 CDS
T05372
Name
(GenBank) ABC transporter ATP-binding protein
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
ptc
Candidatus Phycorickettsia trachydisci
Pathway
ptc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ptc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
phytr_1360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptc02000
]
phytr_1360
02044 Secretion system [BR:
ptc02044
]
phytr_1360
Transporters [BR:
ptc02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
phytr_1360
Secretion system [BR:
ptc02044
]
Type I secretion system
Multiple protein transporter
phytr_1360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_29
AAA_21
DUF5684
RsgA_GTPase
nSTAND3
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AVP87095
UniProt:
A0A2P1P774
LinkDB
All DBs
Position
complement(164400..166160)
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AA seq
586 aa
AA seq
DB search
MKQIPIVDSVIKDLNPLQEALREARKVFIVVAAFSACSNLLMLITPLYSLQVLDRVIGSG
NLNTLLMLSLIIGLIYFIYAMVQVARSFTLIKIGEWLENRVAPALFKNSVAAAALKPTLG
ASQILRDFQTVKTFLTSTGLNTILDSPWTIAYVVALYMIHPYMGNIAVIGSIIIMVFAFI
NAIATTKVLNEATEYQIKSLNQAEIATRNAEVVEAMGMMRNVAHNWHQFNKQSLARQSVA
SYRSSVMSNTARYIRNVISMMVTYWAAYVIVTTNSVQMTTGGMIASSILVGKALAPFDNF
IELWKSITNAMKAFARINFAIKSVNLRDDSMPIPSVKGQVSVEKLFYAHAVKNPLEFLLN
PKYIIKDVSFELASGEVLAIIGHSAAGKSTLAKLLVGVWKPLAGSVRLDSAEVYNWNREN
FGQHIGYLPQGIELFSGTIKENIARMKDTFDPDKVIEAAKMAGAHDMILKLPNGYDSDIG
IAGSNLSGGQKQRVGLARAFYGDPKLVILDEPNANLDEEGENALSKSLIEAKNKGITVIV
ISHRPSVLSVVDRILILHGGEVTSYGTRDEVLRKINMSKGGIIHVN
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaattccaatcgtagattctgtaatcaaagatctcaatccactgcaagaagct
ctgcgcgaagcacgtaaagtttttattgtagtagctgctttttcagcctgttcaaaccta
ttaatgttgattacacctttatactccttgcaagtacttgatagagttattggcagcgga
aaccttaacacattattgatgctatctcttatcattggtcttatatactttatatatgcc
atggtacaagtagcaagatcttttacattaattaagattggcgaatggttagaaaataga
gttgcaccagctctatttaaaaactcagttgctgctgcagcactcaagcctacacttgga
gcaagccagattttacgcgacttccaaacagttaaaacctttttaaccagtacggggctc
aacacaatcctagattccccttggaccattgcgtacgttgttgctttgtatatgatccac
ccttatatgggaaatattgcggtgataggaagtataataataatggtttttgcttttatt
aacgcaattgcaacaacaaaagttttaaatgaagcaacagaatatcagatcaaaagttta
aatcaagcagaaatcgcaacccgtaatgctgaagttgtagaagcgatgggtatgatgaga
aacgttgctcataactggcatcagtttaacaagcagtccttagcaaggcaatcagttgca
agctatagaagtagcgttatgtctaacaccgcacgctatattcgtaatgttatctcaatg
atggtcacatactgggctgcatacgtaattgtaactactaacagcgtacaaatgaccacc
ggtggaatgattgcaagttctattctcgtaggtaaagctctcgcgccttttgataacttt
attgagttgtggaaaagcataacaaacgctatgaaggcattcgctcggattaattttgcg
atcaaatctgtaaatctgcgcgatgattccatgcctattccttcagtcaaaggacaagtt
agcgtagaaaaacttttctatgcgcatgcggttaaaaatccattagaatttttattaaat
cctaaatatataatcaaagatgtttcatttgaacttgcatcaggcgaagtacttgcaatt
ataggacacagcgccgcaggtaaatcaacactcgcaaagcttttagttggagtttggaag
ccgttggcaggatctgtacgtctagatagcgctgaggtttataattggaatcgtgaaaac
tttggtcagcatattggctatttacctcagggcattgaattattcagcggaaccataaag
gagaacatagcaagaatgaaagatacttttgatccagataaggtaattgaagcagctaaa
atggctggtgctcatgatatgattctgaaattaccgaacggatatgattctgacattggt
attgcaggatctaatctttcgggaggacaaaagcaaagagttggtcttgcaagggctttt
tatggtgatccaaaattagttatccttgatgagccaaatgcaaacctggatgaagaagga
gaaaatgctttatcaaaatctttaattgaagccaaaaataagggcatcaccgtaattgtt
atctcacatagaccctcagtcctgtccgtcgtagatagaatcttaatattgcatggcggt
gaggttacatcttatggcacaagagatgaagtattaagaaaaattaacatgtccaaaggc
ggcataatacacgtaaattaa
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