Pseudoalteromonas tetraodonis: PTET_a3139
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Entry
PTET_a3139 CDS
T05282
Symbol
dusB
Name
(GenBank) tRNA-dihydrouridine synthase B
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
ptd
Pseudoalteromonas tetraodonis
Brite
KEGG Orthology (KO) [BR:
ptd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptd03016
]
PTET_a3139 (dusB)
Transfer RNA biogenesis [BR:
ptd03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
PTET_a3139 (dusB)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
NanE
DHO_dh
SOR_SNZ
TMP-TENI
MR_MLE_C
ThiG
Oxidored_FMN
MTD
PcrB
NMO
G3P_antiterm
Motif
Other DBs
NCBI-ProteinID:
ATD04375
LinkDB
All DBs
Position
I:3006769..3007749
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AA seq
326 aa
AA seq
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MNIVRIGSYQLENNVIVAPMAGITDRPFRQLCRRLGAGLAVSEMLSSNPKVWKTEKSMNR
MDHSGESGIRAVQIAGADPELMAQAAQFNVANGAQIIDINMGCPAKKVNKKLAGSALLQF
PELVEEIIDAVVNAVDIPVTLKIRTGWDQDNRNGVEIARIAERYGIASLAVHGRTRACMY
KGDAEYATIRDIKRSVSIPVVANGDITSPEKAKQVLDYTGADAIMIGRAAQGRPWIFREI
DHYLRTGEHMQPPAIAEVRSILMEHLTNLHVFYGEPMGARIARKHVSWYLQTHDSDGQFR
RVFNALDNSEAQVVALEQYFKTLAAN
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
ttgaatatcgtgcgtatcggttcataccaacttgagaataatgtaattgtcgcgcctatg
gcgggcataacggacagaccatttagacagctatgtcgtcgtttaggcgctggccttgct
gtgtctgaaatgctgtcgtctaatccgaaggtttggaaaaccgaaaagtcgatgaaccgg
atggatcattctggtgagtcgggtatacgtgcggtgcaaattgcaggagcagaccctgag
cttatggcacaggccgcacaattcaatgttgcaaacggtgcacagatcatagatatcaat
atggggtgcccagcaaaaaaagtgaacaagaaacttgcaggctcagccttattacagttt
ccagaactcgtggaagagattattgatgccgtagtaaacgcggttgatatacctgtgaca
cttaaaatccgtaccggatgggatcaggacaaccgtaatggtgtagagattgcaagaata
gctgaacgttatggcattgcatcactggctgtacatgggcgcacgcgcgcatgtatgtat
aaaggtgatgctgagtacgccacaattagggatataaaacgttcagtgtcgatacctgtc
gttgctaatggtgatattacatcacctgaaaaagcaaagcaggttttggactatacgggt
gcagatgccattatgattggtcgagccgcccaaggtcgcccttggatatttagggagata
gaccactatttgcgaactggtgaacatatgcagccacctgctatagcagaggtgcgcagt
attttaatggagcatttaaccaacctccatgtgttttacggtgagccaatgggagcacga
atcgctcgcaaacatgtatcttggtatttgcaaacccatgacagtgacggtcagtttagg
cgagtatttaatgcgctcgacaattcagaggcacaggtcgtcgcattagagcaatacttt
aaaacactagcagctaactaa
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