Pyrenophora teres: PTT_18597
Help
Entry
PTT_18597 CDS
T01613
Name
(GenBank) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
3.6.4.13
]
Organism
pte
Pyrenophora teres
Brite
KEGG Orthology (KO) [BR:
pte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pte03009
]
PTT_18597
Ribosome biogenesis [BR:
pte03009
]
Eukaryotic type
Pre-60S particles
Helicases
PTT_18597
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
KRAP_IP3R_bind
Motif
Other DBs
NCBI-ProteinID:
EFQ86226
UniProt:
E3S731
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MAPQNKTDRSFGALTPALSEWILEAVDSMGFVKTTPVQHAAIPMFMKNSDVVVEAVTGSG
KTLAYLIPIVERLLRLDAPIKKHHVGAIIISPTRELATQIHTVLSSLLRFHAPSAALLDP
EDEDTDMEDAAPPKPTFPPGTLRVVPQLLLGGSVTPAQDLSRFLKSSTNVLIGTPGRLLE
LLSSPHVHCSQSSFDALVLDEADRLLDLGFSADLQKILSRIPKQRRTGLFSASVSEAVDQ
LIRVGLRNPVRIAVKVKARAASNGTTGEAGAIEDRKTPASLQMSYLVMPASHKLPAIKKV
LSSMQPQPQKSIMYMATCFSVDYFQHVLPELLKGFTIVPLHGKHPDKVRKRNFIKFVDSV
TPTILLTTDVAARGLDIPSVDLVLQLDAPSDPKTFIHRCGRAGRAGRKGLALTFLSPGRE
EDYIEFLRVRQTPISPLTNPNVEVTAEEAEAMSNRMRKVVKADRALFDKAQRGFVSWVRA
YSKHTASSIFRIPDLDWTELGNAWGLLKLPSMPELKKWDGDRSLGVAMDFSTYAYKDKAR
EQQRQAEQQEYEATKAEGKKRYVTEDKKASAWTQQKDQKALKELRREKKAARREHDRVAA
LTEDERKEEERLKGMIEQMRKNVAEKEAQDAADEFEGFSD
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacaaaacaagacagaccgctcctttggcgccttgacgcctgctctttcagaa
tggatactcgaggctgtggattccatgggctttgtgaaaacaacaccagtgcagcatgcg
gccatccccatgtttatgaaaaactccgatgttgtagttgaagccgtcacgggaagtggg
aaaactctagcttatttgatacccattgttgagcgtctgcttcgattagacgcgcccatt
aagaagcatcacgtgggagccatcatcatatcgccaaccagagagctagcaacacagatc
cataccgtactatcgtcactccttcgatttcacgcgccctcagccgccctgttggacccc
gaggacgaggacaccgacatggaggatgctgctcctccgaagccaactttccccccaggc
acgctcagagttgtgccccaattgcttctcggcggatcggtgactccagcccaagatctc
agcaggttcctgaaatcatccactaatgtactgattggcacacctggtcggctcctcgag
ctcctctcctcaccgcatgtccattgctcgcagtcctcgttcgatgctcttgtccttgac
gaggccgatcgacttctggatttgggatttagtgcagatctccagaagatcctatcccgg
atacccaagcaacgccgaaccggtctttttagtgccagtgtgagtgaagcagtcgaccag
ctcatccgtgtgggtcttcggaaccctgttcgaatcgcggtcaaggtcaaagcacgagct
gcttccaacggcaccacgggagaagctggggctattgaagacaggaaaactccggcgagt
ttgcaaatgtcttatcttgtcatgcctgcttcgcataagctgccagccatcaagaaagtc
ttgtcttcaatgcaaccgcaaccacagaaatccatcatgtatatggcgacatgcttttct
gtcgattacttccagcacgtgcttcctgagttactgaagggttttaccattgtacccttg
cacggcaagcatcctgacaaagtgagaaaaaggaactttataaaatttgtcgactccgtc
acccctaccatactcttaacaactgatgtagcagcacggggactggacataccctcagtt
gatctcgttctgcaacttgacgccccgagtgatccgaagacattcatacatcgctgcggc
cgtgcaggccgagcaggccgcaaaggacttgccctcacattccttagccctggtcgagaa
gaagattatatcgaattcttacgagttcgacagacgccgatatctcccttgacaaacccc
aacgttgaggtaactgcggaagaagcagaagcaatgagtaatcgcatgaggaaggtggtc
aaggcagatagagcactttttgacaaagcacaacgaggctttgtatcttgggtccgtgca
tacagcaagcacactgccagttcgatcttccgcatcccagacctggactggacagagcta
ggtaacgcatggggtcttcttaaacttccaagcatgccggagctgaagaaatgggacgga
gaccggagcctaggtgtcgccatggactttagcacctatgcatacaaggacaaagcacgc
gagcagcagcgacaagccgagcagcaagaatacgaggctacaaaggcggaaggaaagaag
cgatacgtaacagaagataagaaggcatcggcgtggacacagcagaaggaccaaaaggcc
ctgaaggagctacggagagagaagaaggcagcgaggcgcgagcatgatcgggtggcagct
ttgacagaagacgagcgaaaggaagaagagagactcaaaggcatgattgaacagatgcga
aagaatgtggcagagaaagaagcgcaagatgcagcagatgagtttgaagggtttagtgat
tga
DBGET
integrated database retrieval system
