KEGG   Paraburkholderia terrae: C2L65_20095Help
Entry
C2L65_20095       CDS       T05318                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pter  Paraburkholderia terrae
Pathway
pter03030  DNA replication
pter03410  Base excision repair
pter03420  Nucleotide excision repair
pter03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pter00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    C2L65_20095
   03410 Base excision repair
    C2L65_20095
   03420 Nucleotide excision repair
    C2L65_20095
   03430 Mismatch repair
    C2L65_20095
Enzymes [BR:pter01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     C2L65_20095
    6.5.1.6  DNA ligase (ATP or NAD+)
     C2L65_20095
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     C2L65_20095
DNA replication proteins [BR:pter03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    C2L65_20095
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     C2L65_20095
DNA repair and recombination proteins [BR:pter03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     C2L65_20095
   NER (nucleotide excision repair)
    Other NER factors
     C2L65_20095
   MMR (mismatch exicision repair)
    Other MMR factors
     C2L65_20095
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID: AUT61983
UniProt: A0A2I8EQT7
LinkDB All DBs
Position
2:complement(865598..867289)
Genome map
AA seq 563 aa AA seqDB search
MKRFATLYTALDATTSTRDKLDALITYFHAAPPEDAAWASYFLAGGKPRQSVPTRLLTNI
ARTRAGLPEWLFEESYQAVGDLAETIAHVLPPAARTSELGLTQWIEERILTLRGASPDAL
RERLVAYWDELDWSGRFLLTKLIGGGFRVGVARQLVVRALADVAGVDHKLIAQRMVGWTD
SSQPPDAARYLRLIAPAPSGDGSADAQTAQIRHESELGLPYPFFLAHPLQVDPATLGDPS
SWFAEWKWDGIRAQVVKRDGRVWVWSRGEDLITDRFPEVVALGETLPDGTVLDGEILAWE
PGALAPLPFARLQPRITRKSLTKRVLAESPATFLAYDLLEANGDDLRMQPLHERRARLDA
LGATLADTLAKDLLRVSPLVDAGDWNTLATMRDESRARGVEGLMLKERASMYGVGRTKAS
GTWWKWKIDPYAVDAVLIYAQHGHGRRASLYTDFTFAVWDEADGVRTLVPFAKAYSGLTD
EEMREVDAIVRKTTVEKFGPVRSVTPTLVFELGFEGIQASPRHKSGVAVRFPRMLRWRTD
KHIDDADTLATLKGFIDERERAR
NT seq 1692 nt NT seq  +upstreamnt  +downstreamnt
atgaagcgcttcgccacgctctataccgcgctcgacgccacgacatcgacgcgcgacaag
ctcgatgcgctgatcacctatttccacgccgcgccgcccgaagacgccgcgtgggcgtca
tattttctggcgggcggcaagccgcgccagtcggtgccgacgcgtctgctgaccaacatc
gcgcggacccgcgccggcctgcccgagtggttgttcgaagagtcgtatcaggccgtcggc
gatctcgcggagaccatcgcgcatgtcttgccgcccgccgcgcgcacgtcggagcttggc
ctcacgcagtggatcgaggaacgcatcctgacgctgcgcggcgcgtcgccggacgcgctg
cgcgaacggctcgtcgcgtactgggacgaactcgactggagcggccgctttctgttgacg
aagctgatcggcggcggctttcgcgtcggcgtggcgcggcagctcgtggtgcgcgcgctc
gccgatgtggcgggcgtcgatcacaagctgatcgcgcagcgcatggtcggctggaccgat
tcgagccagccgcccgacgccgcgcgctatctgcgcctgatcgcgcccgcgccctccggc
gacggaagcgctgatgcgcaaaccgcacaaatccgccatgaaagcgaactcggcctgccc
tatccgttctttcttgcgcatccgttgcaggtcgaccccgcgacgctcggcgatccgtcg
tcgtggttcgccgaatggaagtgggacggcatccgcgcgcaagtggtgaaacgcgatggc
cgcgtgtgggtatggtcgcgcggcgaagacctgatcacggaccgcttcccggaagtcgtc
gcgctgggcgagacgctgcccgacggcaccgtgctcgacggcgaaatactcgcgtgggaa
ccgggcgcgctcgcgccgctgccattcgcgcggctgcaaccgcgcatcacgcgcaagtcg
ctgacgaagcgcgtgctcgccgaatcgcccgcgacctttctcgcgtacgacctgctcgaa
gcgaacggtgacgatctgcgaatgcaaccgctgcacgagcggcgcgcgcggctcgatgca
ctgggcgcgacgcttgcggacacgctcgcgaaagatctgctgcgcgtatcgccgctcgtc
gacgcgggcgactggaacacgcttgcgacgatgcgcgacgagagccgcgcacgcggcgtc
gaaggtctgatgctgaaggagcgcgcgtcgatgtatggcgtggggcgaaccaaggcgtcg
ggcacctggtggaagtggaagatcgacccctatgccgtcgatgccgtgctgatctacgcg
caacacggccacggccgacgcgcgagcctttatacggatttcacgttcgccgtctgggac
gaggccgacggcgtgcgcacgctcgtgcccttcgcgaaggcatattcaggcctcaccgac
gaggagatgcgcgaggtcgatgccatcgtgcgcaagaccaccgtcgaaaagttcggcccg
gtgcgcagtgtcacgccaacgctcgtgttcgaactcggcttcgaaggcattcaggcgagt
ccgcgccacaagtcgggcgtggccgtgcgctttccccgcatgctgcgctggcgcaccgac
aagcacatcgacgacgccgacacgctcgcgacgctcaaaggtttcatcgacgaacgcgaa
cgcgcacgttga

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