KEGG   Pelotomaculum thermopropionicum: PTH_2220
Entry
PTH_2220          CDS       T00519                                 
Symbol
DnaE
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
pth  Pelotomaculum thermopropionicum
Pathway
pth03030  DNA replication
pth03430  Mismatch repair
pth03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pth00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PTH_2220 (DnaE)
   03430 Mismatch repair
    PTH_2220 (DnaE)
   03440 Homologous recombination
    PTH_2220 (DnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pth03032]
    PTH_2220 (DnaE)
   03400 DNA repair and recombination proteins [BR:pth03400]
    PTH_2220 (DnaE)
Enzymes [BR:pth01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PTH_2220 (DnaE)
DNA replication proteins [BR:pth03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PTH_2220 (DnaE)
DNA repair and recombination proteins [BR:pth03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PTH_2220 (DnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon CAP_N tRNA_anti_2
Other DBs
NCBI-ProteinID: BAF60401
UniProt: A5D017
LinkDB
Position
complement(2323259..2326849)
AA seq 1196 aa
MKKEIIEGREGWNLFVHLHLHSEYSLLDGAARINDAVKRASEMQMPALAITDHGVMFGTV
DFYKACKKAGIKPVLGCEVYVAPRSMDDRTPKIDDNLSHLVLLAENEEGYRNLLNLVSMA
FIRGFYYKPRVDKELLSEHSRGLIALSGCIAGEVSARILAGENEKARQAAGDYRDIFGPE
NFFLELQDHGFAEQRKVNREMLKIHKEMNIPLVVTNDVHYVRRGDAETQDVLLAIQTGKS
VDDPGRMKFQSEELYLKSPEEMNLLFGELSGALRNTVEIAGRCNVEIEFGKYYLPHYPVP
EGYDADTYLAELCYQGARRIYGELSDGVKKRLEYELGVIKQMGYSAYFLIVWDFIHYARQ
NGIPVGPGRGSAAGSLVAYSLGITSIDPLKYGLLFERFLNPERVSMPDIDVDFCFERRGE
IIDYVVRRYGADRVAQIITFGTMAARAAIRDVGRALNMPYGEVDRVAKLVPMELHMTIEK
ALNESPELRELYDQRPEVRKLIDTAAALEGMPRHASTHAAGVVITPEPLTNYLPLYKATD
GPVTTQFAMGTVEELGLLKMDLLGLRTLTVISDALRLIKESTGEELDIERIPVDDQKTYQ
MLARGETAGVFQLESSGMRSILRDLRPEVFEDIVALVALYRPGPLGSGMVDDFIKNKHGF
KKTKYLHPRLEPILKDTYGVILYQEQVMRIASDLAGFSLGEADLLRRAMGKKKPEIIAGL
RSQFIEGAARNGVDGETAGQIFDLMEYFAGYGFNKSHSAAYALVSYQTAYLKANYPLQFM
AALLTSVKDNTDKVAAYIEECRRLGIEVLPPDVNESRESFTVAGNKIRFGLAAVKNVGMG
AVDSIIRAREKDGPFSDYADFCRRLDTRVVNKRVLESLIKCGAFDSLGYRRAQLMAAVDS
GLALAQQSQRERENGQLSLLDFFGGSTDSVSISFPEVGEYPEDELLAMEKETLGLYISGH
PLSRYREALNRLTTVKTVEITDLPDNSEVVLGGLITDVKKINTRRGEVMAFLTLEDLTGT
VEVVVFPRTYTQNRLALRVDEVVLVKGKTSGGGEETKIIGEEISTVESCLGGELHIKIDS
VSSPLLDQIQLILSSFKGESPVFLHFEKERRIIKAGENFWVDLSGPVVSRLEDLLGHARV
KIKSRTGLSAAGKAEKDAAQAGPGPAAGPPAYIPAYDYDSERAGKKKVKFFSILEL
NT seq 3591 nt   +upstreamnt  +downstreamnt
gtgaaaaaagaaataattgaggggagagagggatggaatttgtttgtacatttgcacctt
cattcggaatacagccttcttgacggcgccgccagaatcaatgacgccgtaaaaagggcc
agcgaaatgcagatgccggccctggccataaccgaccacggagttatgttcggcacggtg
gatttttacaaggcctgcaaaaaagccggaatcaagcctgttttaggttgcgaggtatac
gtcgcgccccgcagcatggacgaccggactccgaaaattgacgacaacctgagccacctg
gttttgctggccgaaaacgaggagggctaccgcaacctgctcaaccttgtttccatggcc
tttatcaggggcttttactacaagcccagggtggacaaggagctgctgtccgaacatagc
aggggccttattgccttaagcgggtgcattgcgggggaggtttcggccagaatcctggcc
ggggaaaatgaaaaggcccggcaggcagccggggactaccgggatatcttcgggccggaa
aacttttttctggaacttcaggaccacggctttgcggaacaaagaaaggtcaacagggaa
atgctgaaaattcacaaggagatgaacattcccctggttgtcaccaacgatgtgcactac
gtccggcggggagacgcggagacccaggatgtgcttctggccattcaaaccggcaagagc
gtggacgatccgggccggatgaagttccagtcggaggagctgtacttgaaaagccctgaa
gaaatgaacctgctcttcggcgaactgtccggggcgctccggaacacggtggaaattgcc
ggccgctgcaacgtggagatagaattcggcaaatactacctgccccattatcccgtgccg
gaggggtacgatgccgacacctacctggcagagctctgctaccagggagcccgcaggatt
tacggcgaactcagcgacggggtcaaaaagcggcttgaatatgagctgggcgtcatcaaa
cagatgggctattcggcctacttcctgattgtctgggatttcattcactatgccaggcag
aacgggataccggtggggccaggccgcggcagcgccgccggcagcctggtagcgtacagc
ctcggtataaccagcatagaccccttaaaatatgggttgctctttgagcgttttctcaat
ccggaaagggtctcaatgcctgacatagatgtggatttttgtttcgagcgcaggggagaa
attattgattacgtggtccggcggtacggtgccgaccgggtggcgcagattatcactttc
ggcaccatggcggcgcgggcggccatcagggatgtcgggagggcattgaacatgccctac
ggcgaggtggacagggtggccaagctggtgcccatggagctgcacatgaccattgaaaag
gccttgaacgaatcgccggagttaagagagctgtacgaccagaggccggaggtaaggaaa
ttaatagacaccgcggcggccctggaagggatgcccaggcatgcttccacccatgctgcc
ggggtggtgattactccggagccgctgaccaactaccttcctttatataaggctacagac
gggccggtgacgacccagtttgccatgggaacggttgaagagctgggcctgttgaaaatg
gacctgctgggcttgaggacgctgacggtgatcagcgacgccctgcgtctgattaaagaa
agcaccggagaggagctggatatagagaggataccggttgacgaccagaaaacctaccag
atgcttgcccggggcgagaccgccggcgtattccagctcgaaagcagcggcatgcggtcc
attctgcgggacttaaggccggaagtttttgaggatatcgtggcccttgtggccctgtac
cgccccgggccgctgggaagcggcatggtcgacgatttcatcaagaacaagcacgggttt
aaaaagacgaagtaccttcatcccaggcttgagccgatattgaaggacacctacggggta
atcctgtaccaggagcaggtaatgcgcatagccagcgacctggccggtttttccctgggc
gaggccgacctgctgcgccgggctatgggtaaaaaaaagccggagatcattgcgggcctg
cgctcgcagtttatcgagggagccgccaggaacggcgttgacggggagactgccggccag
atctttgacctgatggagtatttcgccggctatggttttaataaatcccactcggcggct
tatgccctggtatcctaccagaccgcctatttgaaggccaactacccgctgcagttcatg
gcggcgctgttaacctcggtgaaggacaacaccgacaaggtggcggcgtacatcgaggag
tgcaggcggctgggcatcgaggtgctgccgcccgacgtcaacgagagccgggagagcttt
acggtggcgggcaataaaatccgcttcggcctggcggcggtaaagaatgttggaatgggg
gcggtggattcgattatccgggccagggagaaggatggcccttttagcgactacgccgat
ttttgcaggcgcctggacaccagagttgtcaacaaacgagtgctggaaagcctgatcaag
tgcggtgccttcgactcgctcggctaccgccgggcccagttgatggccgccgtggactca
ggcctggccctggcccagcagtcccagcgcgagcgggaaaacgggcagctttccctcctc
gacttttttggcggctcaactgattctgtgagcatcagcttcccggaggtgggggaatac
cccgaagacgaactgctggccatggaaaaggaaacgctgggcctgtacatcagcgggcat
cccctttcccgctaccgggaggccctgaacaggttaaccacggttaaaacggtggagata
accgatttgcccgacaacagcgaagttgtcctgggggggttgatcaccgacgtaaaaaaa
atcaacacccgccggggagaggtaatggcttttctgactctggaggaccttaccgggacg
gttgaggttgtggttttcccccgtacctatacgcaaaaccgcctggccctcagagtggac
gaggtggttctagtgaaaggcaaaaccagcggcggcggcgaggaaaccaaaataatcggg
gaggagatttcaaccgttgaaagctgccttggcggtgaattgcatataaaaattgacagc
gtcagttcgcccctgctggatcagattcagcttattctgagcagttttaagggagagtcc
ccggtgtttctccactttgaaaaggaaaggaggatcatcaaagccggggagaatttctgg
gttgatttatccgggccggttgtaagcaggctggaggatcttctggggcacgccagggtt
aaaataaaaagcaggaccggtctttccgccgcgggaaaagctgaaaaagatgccgctcag
gccggtccggggccggctgccggcccacctgcatatattcccgcgtatgattatgacagt
gaaagagcggggaagaaaaaggtaaagtttttcagcattctggagctgtag

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