Pelotomaculum thermopropionicum: PTH_2220
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Entry
PTH_2220 CDS
T00519
Symbol
DnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pth
Pelotomaculum thermopropionicum
Pathway
pth03030
DNA replication
pth03430
Mismatch repair
pth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PTH_2220 (DnaE)
03430 Mismatch repair
PTH_2220 (DnaE)
03440 Homologous recombination
PTH_2220 (DnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pth03032
]
PTH_2220 (DnaE)
03400 DNA repair and recombination proteins [BR:
pth03400
]
PTH_2220 (DnaE)
Enzymes [BR:
pth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PTH_2220 (DnaE)
DNA replication proteins [BR:
pth03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PTH_2220 (DnaE)
DNA repair and recombination proteins [BR:
pth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PTH_2220 (DnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
CAP_N
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BAF60401
UniProt:
A5D017
LinkDB
All DBs
Position
complement(2323259..2326849)
Genome browser
AA seq
1196 aa
AA seq
DB search
MKKEIIEGREGWNLFVHLHLHSEYSLLDGAARINDAVKRASEMQMPALAITDHGVMFGTV
DFYKACKKAGIKPVLGCEVYVAPRSMDDRTPKIDDNLSHLVLLAENEEGYRNLLNLVSMA
FIRGFYYKPRVDKELLSEHSRGLIALSGCIAGEVSARILAGENEKARQAAGDYRDIFGPE
NFFLELQDHGFAEQRKVNREMLKIHKEMNIPLVVTNDVHYVRRGDAETQDVLLAIQTGKS
VDDPGRMKFQSEELYLKSPEEMNLLFGELSGALRNTVEIAGRCNVEIEFGKYYLPHYPVP
EGYDADTYLAELCYQGARRIYGELSDGVKKRLEYELGVIKQMGYSAYFLIVWDFIHYARQ
NGIPVGPGRGSAAGSLVAYSLGITSIDPLKYGLLFERFLNPERVSMPDIDVDFCFERRGE
IIDYVVRRYGADRVAQIITFGTMAARAAIRDVGRALNMPYGEVDRVAKLVPMELHMTIEK
ALNESPELRELYDQRPEVRKLIDTAAALEGMPRHASTHAAGVVITPEPLTNYLPLYKATD
GPVTTQFAMGTVEELGLLKMDLLGLRTLTVISDALRLIKESTGEELDIERIPVDDQKTYQ
MLARGETAGVFQLESSGMRSILRDLRPEVFEDIVALVALYRPGPLGSGMVDDFIKNKHGF
KKTKYLHPRLEPILKDTYGVILYQEQVMRIASDLAGFSLGEADLLRRAMGKKKPEIIAGL
RSQFIEGAARNGVDGETAGQIFDLMEYFAGYGFNKSHSAAYALVSYQTAYLKANYPLQFM
AALLTSVKDNTDKVAAYIEECRRLGIEVLPPDVNESRESFTVAGNKIRFGLAAVKNVGMG
AVDSIIRAREKDGPFSDYADFCRRLDTRVVNKRVLESLIKCGAFDSLGYRRAQLMAAVDS
GLALAQQSQRERENGQLSLLDFFGGSTDSVSISFPEVGEYPEDELLAMEKETLGLYISGH
PLSRYREALNRLTTVKTVEITDLPDNSEVVLGGLITDVKKINTRRGEVMAFLTLEDLTGT
VEVVVFPRTYTQNRLALRVDEVVLVKGKTSGGGEETKIIGEEISTVESCLGGELHIKIDS
VSSPLLDQIQLILSSFKGESPVFLHFEKERRIIKAGENFWVDLSGPVVSRLEDLLGHARV
KIKSRTGLSAAGKAEKDAAQAGPGPAAGPPAYIPAYDYDSERAGKKKVKFFSILEL
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaagaaataattgaggggagagagggatggaatttgtttgtacatttgcacctt
cattcggaatacagccttcttgacggcgccgccagaatcaatgacgccgtaaaaagggcc
agcgaaatgcagatgccggccctggccataaccgaccacggagttatgttcggcacggtg
gatttttacaaggcctgcaaaaaagccggaatcaagcctgttttaggttgcgaggtatac
gtcgcgccccgcagcatggacgaccggactccgaaaattgacgacaacctgagccacctg
gttttgctggccgaaaacgaggagggctaccgcaacctgctcaaccttgtttccatggcc
tttatcaggggcttttactacaagcccagggtggacaaggagctgctgtccgaacatagc
aggggccttattgccttaagcgggtgcattgcgggggaggtttcggccagaatcctggcc
ggggaaaatgaaaaggcccggcaggcagccggggactaccgggatatcttcgggccggaa
aacttttttctggaacttcaggaccacggctttgcggaacaaagaaaggtcaacagggaa
atgctgaaaattcacaaggagatgaacattcccctggttgtcaccaacgatgtgcactac
gtccggcggggagacgcggagacccaggatgtgcttctggccattcaaaccggcaagagc
gtggacgatccgggccggatgaagttccagtcggaggagctgtacttgaaaagccctgaa
gaaatgaacctgctcttcggcgaactgtccggggcgctccggaacacggtggaaattgcc
ggccgctgcaacgtggagatagaattcggcaaatactacctgccccattatcccgtgccg
gaggggtacgatgccgacacctacctggcagagctctgctaccagggagcccgcaggatt
tacggcgaactcagcgacggggtcaaaaagcggcttgaatatgagctgggcgtcatcaaa
cagatgggctattcggcctacttcctgattgtctgggatttcattcactatgccaggcag
aacgggataccggtggggccaggccgcggcagcgccgccggcagcctggtagcgtacagc
ctcggtataaccagcatagaccccttaaaatatgggttgctctttgagcgttttctcaat
ccggaaagggtctcaatgcctgacatagatgtggatttttgtttcgagcgcaggggagaa
attattgattacgtggtccggcggtacggtgccgaccgggtggcgcagattatcactttc
ggcaccatggcggcgcgggcggccatcagggatgtcgggagggcattgaacatgccctac
ggcgaggtggacagggtggccaagctggtgcccatggagctgcacatgaccattgaaaag
gccttgaacgaatcgccggagttaagagagctgtacgaccagaggccggaggtaaggaaa
ttaatagacaccgcggcggccctggaagggatgcccaggcatgcttccacccatgctgcc
ggggtggtgattactccggagccgctgaccaactaccttcctttatataaggctacagac
gggccggtgacgacccagtttgccatgggaacggttgaagagctgggcctgttgaaaatg
gacctgctgggcttgaggacgctgacggtgatcagcgacgccctgcgtctgattaaagaa
agcaccggagaggagctggatatagagaggataccggttgacgaccagaaaacctaccag
atgcttgcccggggcgagaccgccggcgtattccagctcgaaagcagcggcatgcggtcc
attctgcgggacttaaggccggaagtttttgaggatatcgtggcccttgtggccctgtac
cgccccgggccgctgggaagcggcatggtcgacgatttcatcaagaacaagcacgggttt
aaaaagacgaagtaccttcatcccaggcttgagccgatattgaaggacacctacggggta
atcctgtaccaggagcaggtaatgcgcatagccagcgacctggccggtttttccctgggc
gaggccgacctgctgcgccgggctatgggtaaaaaaaagccggagatcattgcgggcctg
cgctcgcagtttatcgagggagccgccaggaacggcgttgacggggagactgccggccag
atctttgacctgatggagtatttcgccggctatggttttaataaatcccactcggcggct
tatgccctggtatcctaccagaccgcctatttgaaggccaactacccgctgcagttcatg
gcggcgctgttaacctcggtgaaggacaacaccgacaaggtggcggcgtacatcgaggag
tgcaggcggctgggcatcgaggtgctgccgcccgacgtcaacgagagccgggagagcttt
acggtggcgggcaataaaatccgcttcggcctggcggcggtaaagaatgttggaatgggg
gcggtggattcgattatccgggccagggagaaggatggcccttttagcgactacgccgat
ttttgcaggcgcctggacaccagagttgtcaacaaacgagtgctggaaagcctgatcaag
tgcggtgccttcgactcgctcggctaccgccgggcccagttgatggccgccgtggactca
ggcctggccctggcccagcagtcccagcgcgagcgggaaaacgggcagctttccctcctc
gacttttttggcggctcaactgattctgtgagcatcagcttcccggaggtgggggaatac
cccgaagacgaactgctggccatggaaaaggaaacgctgggcctgtacatcagcgggcat
cccctttcccgctaccgggaggccctgaacaggttaaccacggttaaaacggtggagata
accgatttgcccgacaacagcgaagttgtcctgggggggttgatcaccgacgtaaaaaaa
atcaacacccgccggggagaggtaatggcttttctgactctggaggaccttaccgggacg
gttgaggttgtggttttcccccgtacctatacgcaaaaccgcctggccctcagagtggac
gaggtggttctagtgaaaggcaaaaccagcggcggcggcgaggaaaccaaaataatcggg
gaggagatttcaaccgttgaaagctgccttggcggtgaattgcatataaaaattgacagc
gtcagttcgcccctgctggatcagattcagcttattctgagcagttttaagggagagtcc
ccggtgtttctccactttgaaaaggaaaggaggatcatcaaagccggggagaatttctgg
gttgatttatccgggccggttgtaagcaggctggaggatcttctggggcacgccagggtt
aaaataaaaagcaggaccggtctttccgccgcgggaaaagctgaaaaagatgccgctcag
gccggtccggggccggctgccggcccacctgcatatattcccgcgtatgattatgacagt
gaaagagcggggaagaaaaaggtaaagtttttcagcattctggagctgtag
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