Phaeodactylum tricornutum: PHATRDRAFT_32940
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Entry
PHATRDRAFT_32940 CDS
T01075
Symbol
RPA2
Name
(RefSeq) hypothetical protein
KO
K10739
replication factor A2
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03030
DNA replication
pti03420
Nucleotide excision repair
pti03430
Mismatch repair
pti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PHATRDRAFT_32940 (RPA2)
03420 Nucleotide excision repair
PHATRDRAFT_32940 (RPA2)
03430 Mismatch repair
PHATRDRAFT_32940 (RPA2)
03440 Homologous recombination
PHATRDRAFT_32940 (RPA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pti03032
]
PHATRDRAFT_32940 (RPA2)
03400 DNA repair and recombination proteins [BR:
pti03400
]
PHATRDRAFT_32940 (RPA2)
DNA replication proteins [BR:
pti03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
PHATRDRAFT_32940 (RPA2)
DNA repair and recombination proteins [BR:
pti03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
PHATRDRAFT_32940 (RPA2)
MMR (mismatch excision repair)
PHATRDRAFT_32940 (RPA2)
DSBR (double strand breaks repair)
HR (homologous recombination)
PHATRDRAFT_32940 (RPA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
DUF1235
Motif
Other DBs
NCBI-GeneID:
7197227
NCBI-ProteinID:
XP_002177763
JGI:
32940
UniProt:
B7FT26
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All DBs
Position
2:1149167..1149979
Genome browser
AA seq
270 aa
AA seq
DB search
MDYQGGGGFGNSGSAGGSGYSGGGGSAGNSGGKARRSYDEQTMVPVTIRMCLGAMPDEIS
EGVGGLQLEDGRRLYHVRFVAAVRSFEDFSTNVVYTLEDGTGLMEVKQWLDDNHCTAIAE
MRQHTLKENIYLKVVGQIKEYDGKKMVVAESIRVLSTGNELAHHMLEVVYAGETFKRKDS
IVAPQSSMMFNTNTVKGSALHANSSDGGWKDELLRFIRMEGDKSDMGVSIDACIKYIGRP
SSEVHQAVADFSSNGNLYSTIDENYYKFAM
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggactatcaaggtgggggaggttttggaaacagcggaagtgccgggggtagcggctac
agtggcggtggcggtagtgcggggaatagtggaggcaaagctcgtcggtcctacgacgaa
caaaccatggtccccgtgacgattcgaatgtgtctgggagccatgccggacgaaatatcc
gaaggcgtgggaggcttacagctcgaagatgggcgtagactctaccacgtgcgtttcgtc
gcagctgtccgctcgttcgaggacttctcgacgaacgtcgtctacaccttggaagacggc
accggattgatggaagtcaagcaatggctggacgataaccattgtaccgcaattgccgag
atgcgtcagcacacactcaaggaaaatatctatctgaaagttgtggggcagattaaggaa
tacgacggtaaaaaaatggtcgtagccgaatcaatccgggtactatcgactgggaacgaa
ctggcccaccacatgctcgaagtagtctacgctggggaaactttcaagcgcaaggacagt
atcgttgcaccgcagtcatctatgatgttcaacaccaataccgtgaaaggatcggcgctg
catgccaactctagtgacggcggatggaaggacgagctgctgcgctttatccggatggaa
ggggacaagtccgatatgggggtcagtatagatgcctgtatcaagtacattggacgccca
tcgtccgaagttcatcaggccgtagctgatttctcttccaatggaaatctgtactcaact
atcgacgagaactactacaagtttgctatgtaa
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