Phaeodactylum tricornutum: PHATRDRAFT_47943
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Entry
PHATRDRAFT_47943 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K03260
translation initiation factor 4G
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pti03019
]
PHATRDRAFT_47943
03012 Translation factors [BR:
pti03012
]
PHATRDRAFT_47943
Messenger RNA biogenesis [BR:
pti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PHATRDRAFT_47943
mRNA cycle factors
Stress granule specific factors
PHATRDRAFT_47943
Translation factors [BR:
pti03012
]
Eukaryotic type
Initiation factors
eIF-4
PHATRDRAFT_47943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
7203132
NCBI-ProteinID:
XP_002182242
JGI:
47943
UniProt:
B7G5G1
LinkDB
All DBs
Position
15:512733..516915
Genome browser
AA seq
1167 aa
AA seq
DB search
MASPNPAYAGRGGRGGRGGPPPYYNNNNSGVPGPRPPTGAWQPAPTHTMPTQSTAVPNPS
SPNPHHLTPQQQQQQQPPLLNNPYAPNQAGPRGNQPPPYPPPAYYNQHYAAAAQQQQQQP
NPYGATGRVPWQPVPNQGYPSTMRGGVFYPPPAAAAGPGRPSATNAGTIPASVVVPRERK
ALVIMDKDGNVMDFTKTAPKKTTATTSATLAPSAVPAKTESSSQDAGAKLRQAALERIQA
QDKAKKEAEEKAKEQLLQEEQAKKKASDETEVQGKNTSEAQSKVAEEPTKSLADRLKQAP
KPATVKTTTSSSGRIVFSKSALLKFKSTERCMQCPESLPDMTIVKGPARGKSGGNRGGGG
GGGDRRNDHDSGGSSWKRGNAPPRRQSATNNDGGGGGGGGGSYWSRGQAPPPQQQQQNND
KHRNNRGGRGPPPPLYDGPVAPLVKSENHWRPQKNASAFIIAEKQVKAILNKMTKEKFDK
LATQMLEIPLTSSDMLKMMINNVYDKAIDEPTFGDMYADLCKRLSKIAIDFIKIIESDEE
PPTDDDTTTEPASPADDKSSHHTVYRWSNDVSTTDSEIVGPFESEEECIEVALGQANEPT
PVERGEMSLELVSATIRKGVFIKIMKQKKDKDGEEPKLYTVYFPVKEAKECGQQLSNIFL
SKMECVSDATKLNSFKRSLLNKCEEEFDKQDIYVDWKKEKNDYEAKKATLTAQERAETEA
ELDFRRIRIKKQMLGNVKFIGQLYKKGLLKEKIMRYCIASLLKLEANDAKAKNPLYRDTG
DFDIDEEDHEAICSMFTTIGLTIDTLSTSDFMSVCFEKISKLSNESSLPARSRFMYKDLL
ELRDNRWVPRRKEEKAKTLEEIRKDVEEEERRQAQQSMRNNSNRGGGGGSRDFRGSGIGN
AFGGSNRSRPQKLSSETDADGFVAVPTKTGFASLRGPAGKPRHQPSESTSTVSTKSSAFS
ALAKDRDPPSSKKSPAPLDSDTLERRIKRIRTDFMGDGGNVEELLLSWDEICGTPKAGVT
LVQKNSDRMMDCKEDERQAIVRIVAILAEKGKLTKEDVRTGLQDAIEFIDSFILDSPRAY
EYLGDMLGEMLKLKAIDVAWLCKETEKTKVDQNSEAPIRLTRATISALKAAAGVDFAKKC
FSGSSEKDLIGLIGSDSWKSMAADQFS
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctccaaatcctgcgtatgcgggacgtggaggtcgtggcggacggggtggacct
ccgccctattacaacaacaacaatagtggtgtaccgggtccccgtcctcccaccggagcc
tggcaacccgcacccactcatacgatgccgacacagtctaccgccgtgccgaatccgtca
tcgcccaatcctcaccatctcacaccccaacaacaacagcaacaacaaccacctctcctg
aacaatccctacgcgccaaaccaagcaggaccccgtggaaaccagcctcctccataccca
cccccggcctactacaaccagcactacgcagctgccgcacaacagcagcagcagcagccg
aatccttacggcgccacgggtcgggttccgtggcagcccgtaccgaatcaaggctatccc
tccaccatgaggggtggcgtcttttatccacctcccgccgctgccgctggacccggtcgt
ccttccgctaccaacgcggggaccatcccagcctccgtcgtggtgccccgcgaacgcaaa
gctctcgtcattatggataaagacggcaacgtgatggatttcaccaaaacggctcccaaa
aagactacggccacgacttcggcgactcttgccccgtcggcggtcccggccaaaacggaa
tcgagcagccaagacgctggcgccaagttgcgacaggccgcactcgaacgcatccaagcc
caagacaaggccaaaaaggaagccgaagaaaaagcaaaggaacaattgttacaggaagaa
caagccaagaagaaagcaagtgacgagaccgaagtacaaggtaaaaacacgtccgaggcc
caaagcaaggtcgccgaagagccaaccaagtctctggcggatcgtttgaagcaagcaccc
aaacccgccactgtcaaaacgacgacttcttcttccggtcgtatcgtcttttccaagtcg
gcgttgctcaaatttaagagcacggaaagatgtatgcaatgtcccgaatcgctccctgac
atgacgatcgtcaagggacccgcccgtggcaagagcgggggcaaccgcggtggtggtggt
ggaggaggcgatcgacgcaacgaccacgacagcggtggcagtagttggaaacgaggcaac
gcacccccacgtcgtcaaagcgccaccaataacgatggcggtggtggtggcggcggcggc
ggcagctactggagccgcggacaagctcctccgccacagcaacagcaacaaaacaacgac
aagcaccggaacaatcggggtggacgcggtcctccgccacctctgtacgacggccccgtc
gcgcctctagtgaagtcggagaatcactggcgtccacaaaagaacgcgtcagcttttatt
attgccgagaaacaggtcaaggctattttgaacaagatgaccaaagaaaaattcgataaa
ctcgcgacacagatgctggagattcctttgacctcttctgatatgttgaaaatgatgatt
aacaacgtgtacgataaggccattgacgaacctactttcggagatatgtacgctgatttg
tgtaagagactttccaagattgctatcgactttattaaaattatcgagtcggacgaagag
cccccgacggacgacgatacgaccacggaaccggcatctccagctgacgataaaagtagc
caccatactgtttatcgctggtcgaacgacgtgagtactaccgatagtgagattgttgga
ccgtttgaatccgaggaagaatgcatcgaggttgctcttggtcaagcaaatgagcctact
ccggttgagcgaggcgaaatgtctctggaactggtcagcgcaaccattaggaaaggcgtg
tttatcaaaataatgaagcaaaaaaaggacaaagatggcgaggaaccaaagctctacacc
gtatatttcccagtaaaggaagcaaaagagtgtggtcagcagctgtcaaacattttcctg
agcaaaatggaatgtgtttcagatgcgaccaaacttaatagcttcaagcgctcgctactc
aacaaatgtgaagaagagttcgacaaacaggatatttatgtagactggaagaaagaaaag
aatgattatgaggcaaagaaggctacacttactgctcaagaacgggctgaaacagaagct
gagctggactttcgtcgcattcgaattaagaagcagatgctcggaaacgttaagttcatt
gggcagctgtacaagaagggtttattgaaggaaaaaattatgcggtactgcattgccagt
ctgctaaagctggaagcaaacgacgccaaagccaagaatccgttgtaccgagacaccggt
gattttgatatcgacgaggaagaccacgaagcgatttgcagcatgttcacgactattggt
ctgactattgacactctttcgacctctgatttcatgagcgtttgttttgagaagatttca
aaactgagcaacgaatcaagcctccccgcccgatctcgtttcatgtacaaagatttgctt
gagctacgtgacaatagatgggttccgcggcgcaaggaagaaaaggcgaaaacgctcgaa
gagattcgaaaagatgtggaagaggaagagcgacgacaggctcagcagtcgatgcgcaat
aatagcaaccgtggaggtggcggtggcagccgagactttcgtggtagtggcatcggcaat
gcattcggaggaagcaaccgatcgcgtccacagaagctatctagcgaaacggacgctgac
gggttcgtcgctgtccccaccaaaactggctttgcgtccctgagagggccagcagggaaa
cccaggcaccagcctagtgaaagtaccagcacggtcagtacgaaatcgtcagctttttct
gcgcttgctaaggatcgagatccgccttcatcgaagaagtctcccgccccactcgatagc
gataccttggaacgccggattaagcgtatacgaacggattttatgggtgatggagggaac
gttgaggagcttctactaagctgggacgagatatgtggcacaccaaaggctggcgtcacc
cttgttcaaaagaattccgatagaatgatggactgcaaagaggatgaaaggcaagccatc
gtgagaattgtagcgatactagccgagaaaggcaagctcacaaaagaggacgttcgcact
ggtctgcaagacgcgattgaatttatcgacagtttcatacttgattcaccacgggcttac
gagtacttgggtgacatgcttggggaaatgctgaagttgaaagcgattgatgtcgcatgg
ctttgcaaagagaccgagaagacgaaagtggatcaaaatagcgaggcaccgatccgacta
acacgcgcaaccatttcagccttaaaggcagccgcgggagtagactttgcaaagaaatgt
ttttctggatccagcgagaaggatttgattggtttgattggttccgattcctggaaatct
atggcggctgatcaattttcctaa
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