Phaeodactylum tricornutum: PHATRDRAFT_48177
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Entry
PHATRDRAFT_48177 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
PHATRDRAFT_48177
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
FtsK_SpoIIIE
AAA_30
Methyltransf_24
Motif
Other DBs
NCBI-GeneID:
7203506
NCBI-ProteinID:
XP_002182682
JGI:
48177
UniProt:
B7G687
LinkDB
All DBs
Position
16:complement(421251..425888)
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AA seq
1321 aa
AA seq
DB search
MTTTTTTTRNVPKRDGKAHPVLEPTGEPALVTALRRVDPLLQFLSKATGQTGIPLPTLRR
SLPAGYDATALLQQLQALHDRGILQFTYRRCDEQHLGDSASTTTVATTDPTTTTSPTSVT
MEVGSTFTRTTTTTTIRPTLQWEDATIWIGFPPPLTAHAVVDKLHTARRGLGTLHGSTST
AARRRIVALQRILQHEATHGSDPAPVPTESSLPSPPPAGNKAWQPEPHPEDSDNDTEEPI
QRDAKLARPALQKLLGLQGCRQTEPTLDKDALPVSILAAQASYAGSHASQEAAFAVLPKH
TAAQIPNSLKRVFGLPVPIQGIQGTKQLYTHQAAAIASILAGTHTSVCTGTGSGKSLCFL
LPTLTAAYHGHGVSLLLFPTKALAQDQLAKLTKLLQSDADLASRIRVATLDGDTAHANRA
EIAQSCNVILTNPDTLHAAVLPHWKTTYGTMLSAVRFVVIDEAHMYEGAFGAHVALVLGR
LARISLVAAAAVSQDYGTATAAPLRPPVFVSTSATLPWPEQHFRLLCPISSTDSVAVFTA
EKDGSPRSAKHFWVWNPPILHQDGTSTGKVRFLPTHPPASMTPDEQPKASLVGKKRPRTQ
RNTRISSTNQAKVKSNHHGYDPQLQAFGHGPARLHRRHAADETALLLAQAVANGIRCIAF
CKTRNLVEWVFERALTILQKEDSTRSLASKVESYRGGYSMLERRQIEQRLFRTELLGVVG
TNALELGVDIGGIDLTLHCGYPSSYASLLQQAGRAGRGGTARLNVPSCAVVVCFNSPSEQ
HIWRHPKTLLSKGVSAPHTIPINSGLVQGHLLCASEEFPLTGKYTPTTIQSTAKAAKVHH
DLLNDYDLFGGMDIYEEALDALRSTGSVTEEIIATPAASFGKITIYKAHPLMKKAWSRVS
IRSIEPVNYAVVDISHPGQGGRTNGIHDEGAVMDTLPYSRIFYHAHPGAIITHRGRKYKV
LSMTRPPAFTPENFSYGRSMSLAAFAKPTGAKYSTRPLSNMHITVVKQMERIQLEPNSSF
VTRDSFGAKSVDFSYELEQADSLSSSIPSKQSNQKQEESDEAGLSSTLAGYGIVNVKRSV
HGYKKLSLITRAELSRTELSLPELEFESFGVWFDTDAGALTPRLGETYGPGVHALSHAIL
AVAPLFAPGLVRSDLECDHSFFAPTQVMLFDERAGGSGSSERLWNYFFQPNSILDAAIKL
LEECYSCCWDKTYDGGCPACLHASNCIKFNMSLSRSAAIVIGKHMLERIQSTDFYRRNAD
TAKSLGRTTCEAGASPRRIARKKALDKAKEMQSSKDRHFVVGRVSWPLDGDEMQCKQVKD
S
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgactaccacaaccactacgacgaggaacgtcccaaagcgtgacggcaaggcccatccg
gtgctcgagccgacgggggaaccggccctcgttacggctttacggagagtcgatccgtta
ctgcaatttctttccaaagcaacgggtcagacgggaattccgttgcctactctacgacga
tccctgccggcgggttacgacgccacggcgctgctccaacaactccaagccttgcacgat
cgtggcattctgcaattcacctaccgacgttgtgacgaacaacatcttggggactccgcc
tccacgacaacagtggcaaccacagatcccacaaccaccacgagtcccacgagtgtgaca
atggaggtcgggtccacattcacccgtaccaccaccaccaccactattagaccaactttg
caatgggaagacgcaacgatctggattggttttccgccaccactaacggcacacgccgtc
gtcgacaaactccacacggcacgacgtggcttggggactttgcacggtagtacctctacc
gccgctcgtcgacgtatcgtggccttgcaacgcatactccagcacgaagctacacacggg
tcggatcccgcgccggtgccgaccgaatcgtccctaccatcaccaccacccgccggcaac
aaggcctggcaaccggaaccacatccggaagactcggacaatgatactgaagaaccgata
cagagagatgccaaactggctcgaccggctctacagaaactgttgggtttgcagggatgt
cgacagacggaaccaacgttggacaaggatgccttgcccgtttccatactggctgcgcag
gcttcgtatgccggatcgcacgcctcccaagaagccgcttttgcagtattgccgaagcac
acggcagcgcagattcccaacagcttgaaacgcgtctttggtttgcccgtaccgatacaa
gggattcagggaacaaaacagttgtacacgcaccaggccgccgccattgcgtcgatacta
gctggaacgcacacgtctgtctgcaccggcaccgggtccgggaaatccttgtgcttttta
ttacctaccttgacggcggcctaccacggtcacggcgtatccctactcttgttccccacc
aaggccttggctcaagatcaactggccaagctcacgaagttgctacaatcggatgctgat
ctggcatcccgcattcgagtagccaccctcgacggcgatacggcccacgcaaatcgcgct
gagattgcgcagtcctgcaacgtcatcttgaccaatcccgatacgttgcacgcggccgtc
ctgccccactggaaaacaacctacggtaccatgctttctgccgtgcgcttcgtcgtcatt
gacgaggcccacatgtatgaaggcgcttttggagcccacgtggccctcgtcctcgggcgt
ttggcccggatcagtctcgtggcggcggccgccgtgtcccaagactatggaacggctacg
gcggctcccctgcgaccacccgtattcgtgtccacgtcagcgactctcccctggcccgaa
cagcactttcgactcctttgtcccatttcttcgaccgattctgtggcggtctttacggcg
gaaaaggatgggtcgccacgctctgccaaacatttttgggtctggaatccgcccattttg
caccaggatggcacgtccaccggcaaggtgcgctttctacccacacacccgccagcgtca
atgacacctgacgaacagccaaaggcctctctggttgggaaaaaacgtccacgtacgcaa
cggaacacccgaattagtagcacgaaccaggcgaaagtcaaatccaatcatcatggatac
gatccacagttgcaagcctttggacacggaccagcgcgacttcaccgtcgtcacgcagcc
gacgaaacagcgttgcttctagcccaggccgtcgcgaatggaatccgatgcattgcgttt
tgcaaaacacgaaatttggtcgaatgggtctttgaacgagccttgacgattctgcaaaag
gaggactcgacaaggtcactcgcgtcgaaagtggagagctaccgggggggatatagtatg
ctggaacgtcggcaaattgagcaacggctgtttcgtacggagcttttgggtgttgtcgga
acaaatgctctagagctgggcgtggacattggtggcatcgatctgacgctacattgcgga
tatccgtcgtcctacgcaagtttgctccagcaggctggacgcgccggtcgtggcgggacg
gcgcgtttgaacgttccgtcctgtgccgttgtggtttgcttcaattctccttctgaacaa
catatctggcggcatcccaagaccctattgagtaaaggtgtttcggcaccgcataccatc
ccaatcaacagtggtctcgtgcaaggccatctactatgcgcgagcgaagaatttccgctg
actggaaaatatacaccaacgaccatccaaagcaccgcgaaggcggcaaaggtgcaccat
gatctattgaacgattacgacctttttggcggaatggacatttacgaggaggcactggac
gctttgcgatcaactggttccgtcacggaagagataattgcaacccctgcggcttccttc
ggtaaaattacgatatacaaagcacatcctttgatgaagaaagcatggtctcgcgtttcc
attcgctctattgagcccgtcaactatgctgtggtcgatatctcgcatcctgggcaaggt
ggacggaccaacggtattcacgacgaaggggctgtcatggacacgctaccctactctcga
atattctaccatgctcatccaggagctattattacacacaggggtcgaaaatacaaggtt
ctttccatgacgcgacctcctgccttcactcctgaaaactttagctacggtcggagcatg
agcttggcagcttttgcaaaaccaacgggtgcaaaatattcgacgcgacctttgagtaat
atgcacataactgtggtcaaacagatggagcgtatccaattggaaccaaactcgtccttc
gttacgagggattcgttcggcgcaaagtcggtagatttcagctacgagctagaacaagcc
gattcattgtcctcgtcgattccatcaaaacaatctaaccagaagcaggaagaaagtgac
gaagcagggttgtcctcgacgctggctggatacggaattgtcaatgtgaaacgaagtgtc
catggatacaagaagttgtcgttgattacgcgtgctgaactaagtcgtactgaattgtct
cttcccgagcttgaatttgaaagttttggtgtgtggtttgacacggacgcaggggctctc
actccaaggcttggtgaaacatatggtccaggagttcatgcgctctcacatgcaattctt
gcagtcgcgcctctgtttgcgccggggctggttcgctctgatttggagtgtgatcactcc
ttcttcgcacccactcaagtcatgctgtttgatgaaagagcaggtggatctggatcgtcg
gaacgtttgtggaactactttttccagccgaatagcattctagacgccgcaatcaagctc
ctcgaggagtgttactcgtgctgctgggacaaaacctacgatggcggctgtccggcttgt
ctacatgcgtcgaattgcattaaattcaacatgagtctttcacgatctgcggccattgtt
atcggaaagcacatgctggaacgtatccaatctaccgatttctatagaagaaacgctgat
accgcgaagagtttagggaggacaacttgcgaagcaggcgcgagtccaaggagaatagcg
cggaaaaaggctttagacaaagcgaaagagatgcagagctccaaagaccggcatttcgtt
gttgggagggtatcttggccacttgatggcgatgagatgcaatgcaagcaagtcaaagat
agctaa
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