Phaeodactylum tricornutum: PHATRDRAFT_56450
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Entry
PHATRDRAFT_56450 CDS
T01075
Symbol
VDR
Name
(RefSeq) violaxanthin deepoxidase-related, chloroplast precursor
Organism
pti
Phaeodactylum tricornutum
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Gene cluster
GFIT
Motif
Pfam:
VDE
Motif
Other DBs
NCBI-GeneID:
7196960
NCBI-ProteinID:
XP_002177513
JGI:
56450
UniProt:
B7FR37
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Position
1:complement(2420707..2422750)
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AA seq
587 aa
AA seq
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MKLHRKGRYRLLVTAVLLGTVCSFVPENLRSGSVRIPRKNANAGSVPGTHTVSKQPSASA
TRHKVSQTSIDANALPIKNDLIQGPVSANKSIGSITFLLPSSGADEIKTNFGSSSPVGNP
SLDEAVRHLANKSQYFSDGRVETRIVYVPIEEQDESVWKDLLETDVLLAMGLQYEADLAF
ARKLFQQRHDRDAEHRFRQCHFAIDCAQSFPTMVGPYDSENPSFRAKLLPWTKHASGKRL
SQQMVALLQRGNSDDFVFAIMLFLNQFSGSSVDWVKHSIDATWEKGPLRNAQEVVSMVSK
CGDCVVKCVQDDNCRECLEVLTALDTRDQVASYRTIVSYESDLLKDFSFCILQKNNIFNC
DASLPTLPNVQPVATWREQPLTEDIARSLLVGHLNDEAAPESSLRTDISWKVACGANEAY
DKFPSQNQLFYPAARGRDLWYDPVFRVETLDGRNVWCKRHYKVRPADIPGTFRFSVLDNG
ITSNEFWTIVGVADDLSWIVFHYAGAASAVGQRYLGGLLCTADGSLPDESQRPEIWRVLR
SAGIQPWDLYTVNNDLTSPGAQEAGPPPLDYFRREVLAKRAASSPHP
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccaccggaaaggtcgttatcgtctcttggtcacggcagtattgctgggaacc
gtgtgttcctttgttcccgagaatttacggtcgggatccgttcgcattccgagaaaaaat
gcgaacgcgggcagcgtaccaggaactcacacggtttcgaaacaaccatccgcatcggcg
acgcgtcataaagtctcccagacttcgatcgacgcgaacgctctaccaatcaagaacgac
ttgatccaaggacccgttagcgcaaacaaatctattggttccatcacttttttgcttcca
tcctcgggagcggacgaaatcaaaaccaactttggatcgtcgtcgcccgtgggaaatcct
tccctcgatgaagccgttcgtcatcttgctaacaaatcacagtacttttcggatggacgg
gtggagacgagaattgtgtacgttcccatcgaagagcaagacgaatccgtttggaaggat
ttgctcgaaaccgacgtcttgctggccatgggtttacaatacgaagccgatctcgccttt
gcccgaaagctcttccagcaacgccacgatcgagatgcggaacacagattccgccagtgc
cactttgccattgactgcgcacaatccttcccaaccatggtaggaccatacgactcggaa
aatccatcgttccgtgcgaaactattgccctggaccaagcatgcttccggaaagcgtttg
agccagcaaatggtggcattgctacaacgaggaaactcggacgactttgttttcgcgatt
atgctctttctgaatcagttttcggggtcgtcagttgactgggtcaagcacagcattgat
gcaacttgggaaaagggtccactacggaacgcccaggaagttgtctccatggtttccaag
tgcggagactgtgttgttaaatgcgttcaggacgataactgtcgcgagtgtctcgaagtg
ctgaccgcgctggatactcgtgatcaggttgcatcctaccgtaccattgtctcctacgag
tcggatttgctgaaggacttttccttctgcattttgcaaaagaacaacattttcaattgc
gacgcttctctcccgaccttgcccaacgtgcaacctgtcgccacgtggcgggaacagcct
ctgacggaggacattgctcggtcgctgctcgtgggccacttgaacgacgaagcggcaccc
gaaagttctttgcgcaccgacatttcctggaaagtcgcttgcggtgccaacgaagcctat
gataagtttccttcgcagaaccaactcttctatcccgctgctcgcggtcgagatttgtgg
tacgatcccgttttccgcgtagaaactttggatggtcgaaatgtttggtgcaaacgtcat
tacaaagtgcgtccggccgacattcccggtacttttcgattttcagtgctcgacaatggt
attacgtcgaacgaattctggaccattgtcggcgtcgctgacgatttgtcctggattgtc
tttcactatgccggtgccgctagtgccgtaggacaacgatatctaggtggattgctgtgt
accgcggatggatcgttgccggacgagtcgcaacgaccagagatttggcgcgtgttgcga
agtgccggcattcaaccatgggatttgtacaccgttaacaacgacttgactagtccaggg
gcccaagaggccggtccaccaccgctggactatttccgcagagaggtcctggccaagcga
gcggctagtagtcctcatccttag
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