KEGG   Planktomarina temperata: RCA23_c00050
Entry
RCA23_c00050      CDS       T03229                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
ptp  Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:ptp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ptp03032]
    RCA23_c00050 (gyrB)
   03400 DNA repair and recombination proteins [BR:ptp03400]
    RCA23_c00050 (gyrB)
Enzymes [BR:ptp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     RCA23_c00050 (gyrB)
DNA replication proteins [BR:ptp03032]
 Prokaryotic type
  DNA Topoisomerases
   RCA23_c00050 (gyrB)
DNA repair and recombination proteins [BR:ptp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      RCA23_c00050 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook Toprim_4
Other DBs
NCBI-ProteinID: AII85578
LinkDB
Position
4567..6984
AA seq 805 aa
MSEQTVDVEEYGADSIKVLRGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HADHVLVRINADSSVSVADNGRGIPVGIHEEEGVSAAEVIMTQLHAGGKFDSNSYKVSGG
LHGVGVSVVNALSVWLELRIWREGKEHVARFEHGDTAEHLKVVSECGDRTGTEVRFLAST
ETFSNLEYKFEILEKRLRELAFLNSGVRIILEDLRPAEPLRSELYYDGGVREFVKYLDRS
KSSIMEEPIYVKGTRDDIGVEVAMWWNDTYHENVLPFTNNIPQRDGGTHMAGFRGALTRT
INNYAQSSGIAKKEKISFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPAVEGL
VGEKLAEWFEENPAQAKVIVGKIVEAAMAREAARKARDLTRRKTAMDVNFLAGKLKDCSE
KDPSKTEVFLVEGDSAGGSAQTGRDRMTQAVLPLRGKILNVERARFDRMLGSQEIGNLVM
ALGTGIGRDEFNIKKLRYHKIVIMTDADVDGAHIRTLLLTFFFRQMPELIEGGYLYIAQP
PLFKVSRGRSEVYLKDQPALDEYLIEQGIEGALLRLTNGEEIIGADLMRVVEEARQLKRI
VDAFPTHYPRHILEQAAIAGAFVPGAVDRDLQGMADAVARRLDLIALEYERGWQGRPTQD
RGMRLARILRGVEEVRNLDGAMLRSGEARRTGMLTQSLQDTYSGPCTLVRKDRVQVVNGP
LTLLSAILEEGEKGLSLQRYKGLGEMNPDQLWETTLDPDARTLLQVRVDDVAEADDLFTK
LMGDVVEPRREFIQNNALNVSNLDF
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgtctgagcaaactgtggatgttgaagaatatggcgcagattccattaaggttcttagg
ggcttagaggctgttcgcaaacggccggggatgtatatcggtgacacggatgatggctcc
ggtttgcatcatatggtttatgaggttgtggacaatggcatcgatgaggcgctggctggc
catgcggatcatgttttggtgcggatcaatgccgacagctcggtttcggtcgcggataat
ggtcgcggcattccagttggaattcacgaagaagagggcgtgtctgccgctgaggtgatt
atgacccagctgcatgcgggtggtaagtttgacagcaattcctacaaggtttctggcggt
ttgcacggggttggggtttcggttgtgaatgccttgtcggtatggctggaactgcgcatc
tggcgcgaaggcaaagagcatgtcgcacggttcgaacatggtgacacagcagagcaccta
aaagttgtgagcgagtgtggcgatcgcaccggcacggaagtccgtttcttggcgtcgaca
gagaccttttcaaatcttgagtataaatttgaaatattggaaaagcgcctgcgcgaattg
gcattcttgaattctggggtgcggattattcttgaagacctgcgcccggcagagcctttg
cgcagtgagctgtactacgacggcggtgtgcgtgaatttgtgaaatatctcgaccgttcc
aaatcctcaatcatggaagagccgatttatgtcaaaggcacccgtgatgatatcggtgtt
gaagtggcgatgtggtggaatgacacctatcacgaaaatgtcctgcccttcaccaataac
atcccacagcgtgatggcggcacccatatggcgggctttcgaggggccttgacccgaacg
atcaataactatgcgcaatccagcggcatcgccaaaaaagagaaaatcagcttcacaggc
gatgacgcacgcgagggtttgacctgcgtgttatccgtcaaagttcctgatcccaaattc
tccagccagaccaaagataaattggtcagctcagaggtgcgcccggcggttgagggtttg
gtgggtgagaaattggccgagtggttcgaggaaaaccctgcgcaggcaaaggttattgtt
ggcaagattgttgaggctgctatggcgcgtgaagcggcgcgcaaggcccgcgacctcacc
cggcgcaagacagcgatggatgtgaacttcttggcaggaaagctcaaggattgttcggaa
aaagacccctcaaaaactgaagtatttttggtcgaaggcgatagcgccggcggttctgcc
caaactggacgtgaccgcatgacccaagcggttttgccattgcgcgggaaaattttgaac
gtggagcgcgcgcggtttgaccggatgctgggcagccaagaaattggcaacttggttatg
gcgctgggcactggcattgggcgcgatgaatttaatatcaaaaagctacgctatcataaa
atcgtgatcatgaccgatgccgatgtggatggtgcgcatatccgcacgctcttgctgacg
ttctttttccgtcaaatgccagaattgattgaaggtggttatctctatatcgcgcaaccc
cccttgtttaaggtgagccgggggcgttctgaagtttatctcaaggaccagccagccctg
gatgaatacttgatcgaacaaggcattgagggcgctttgctgcgcttgaccaatggcgaa
gaaattattggcgccgatttgatgcgtgttgtggaagaggcgcgtcagctgaagcgcatt
gttgacgcattccccacccattacccacgtcatattttggagcaagcggcaatcgccggg
gctttcgtgcctggggcggttgatcgtgacttgcagggcatggcggacgccgtggcgcgc
cggctcgatctcattgctttggagtatgaacggggttggcaaggtcgcccaacccaggac
cgcggcatgcgcttggcgcggattttgcgcggcgtggaagaggtgcgcaatctcgatggg
gcaatgctgcggtccggcgaagcgcgtcgcacagggatgttgacccaaagtttgcaagat
acctacagcggcccgtgcacattggtgcgcaaagatcgggtgcaggtggtcaatggcccc
ctcacgctgctgagcgcgattttggaagagggtgagaaggggctgtcgctgcaacgctac
aaaggcttgggtgaaatgaaccccgatcagctttgggaaaccacattggatccagatgcg
cggacattgttgcaagtgcgggttgatgatgtcgcggaagcggatgatctgtttaccaag
ctgatgggcgatgtggtggagccgcgtcgggaattcatccaaaataacgcgctcaatgtg
tccaacttggatttctaa

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