Planktomarina temperata: RCA23_c05150
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Entry
RCA23_c05150 CDS
T03229
Symbol
xylH
Name
(GenBank) xylose transport system permease protein XylH
KO
K10544
D-xylose transport system permease protein
Organism
ptp
Planktomarina temperata
Pathway
ptp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RCA23_c05150 (xylH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptp02000
]
RCA23_c05150 (xylH)
Transporters [BR:
ptp02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
RCA23_c05150 (xylH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
AII86075
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Position
551693..553006
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AA seq
437 aa
AA seq
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MTDTSTSKAATKSPQGLIARFLSDTEIDTRLLGMLGALALIWGGFHLYGVIFNNFGAFLT
PRNLWNLSVQTSSIGIMATGMVLVIVTRNIDLSVGSMIGVIAMSMGLLQVEVLPHFVGLG
HWSIWVLAVICGLIVGTLIGALHGWLIAYREIPAFIVTLGGLMVWRGMAFLSAGGRTISP
VDSKFALLGGGPYGAVGAMGSWIVGILACIGVAYIIYSGRKARVLHNFRLRPLWAEAFLA
LVGWATIIGAVMLVNSYPWPKGIVRQYGAKIGQDLEGTFISHGFAIPVLILVAVGIAMTI
LVTRTRFGRYVFAIGGNPEAAALAGIDTRWVTLKVFSLMGTLTAIAAIIASARLNSATNA
LGTLDELYVIAAAVIGGTSLAGGVGKIYGAILGALVMQSLQSGMVLIGFDSAIQRIVVGV
VLVLAVYLDILYNKRVK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgactgatacttcgacatcaaaggccgcaaccaaaagcccacagggtttgattgcgcgc
tttttgagcgacactgagatagatacccgcctgctgggcatgctgggcgcgttggcactg
atttggggaggatttcacctttatggtgtgatcttcaataatttcggagcttttttgacg
ccgcgcaacctttggaatctatcggttcaaacctcttccattgggatcatggcaaccggc
atggtgctggtgattgtcacgcgtaacattgacctctcggtgggatcgatgattggggtg
attgcaatgtccatggggctgttgcaggtggaggtgctgccgcattttgtcgggcttggt
cattggtcaatctgggttctcgccgtgatttgtggcctgatcgttggcacattgattggg
gctctgcatgggtggctgatcgcctatcgcgaaattcctgcttttattgtgaccctgggc
ggtttgatggtctggcgcggcatggcgtttttatcggccggtggccggacgatctcgccc
gtggacagcaagtttgcgcttctgggcggtggtccctatggcgctgttggtgcgatgggc
agttggattgttgggatattggcctgtatcggcgtggcctatatcatttactcgggccgc
aaggcgcgcgtgctgcacaatttccgcctgcgccccctctgggccgaagccttcttagcc
cttgttggatgggcgaccatcatcggtgctgtaatgctggttaattcatacccctggccc
aagggcatcgtacgccaatatggtgccaagattgggcaagacctagagggcaccttcatc
tctcacggctttgccattccagttttgatcttggttgcagtcggcattgccatgactatt
ttggtcacacgcacgcggtttggtcgctatgtttttgccatcgggggcaacccggaggcc
gccgctttggcggggatcgatacccgttgggtgacgctcaaggtgttctccttgatgggc
acattgaccgccattgcagcaatcatcgcttcggcccgtctcaattccgcaaccaatgca
ttgggcacgcttgacgagctttatgtgattgccgccgcagtgattggcggcacctcactg
gctggcggggtaggtaaaatttacggtgcgattttgggggctttggtgatgcaaagcttg
caatcgggcatggtgctcatcggatttgacagcgccattcaacggatcgtcgtgggtgtg
gttctcgtgctcgctgtctatctcgatattctctacaataaacgcgtgaagtga
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