Planktomarina temperata: RCA23_c05560
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Entry
RCA23_c05560 CDS
T03229
Name
(GenBank) hypothetical protein, OmpA
KO
K03286
OmpA-OmpF porin, OOP family
Organism
ptp
Planktomarina temperata
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptp02000
]
RCA23_c05560
Transporters [BR:
ptp02000
]
Other transporters
Pores ion channels [TC:
1
]
RCA23_c05560
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA
BON
SLATT_2
Motif
Other DBs
NCBI-ProteinID:
AII86115
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All DBs
Position
complement(596418..598304)
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AA seq
628 aa
AA seq
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MRIIPVILSALAFAAAGVGAYFAAGLTVSWIENSSATAVEKRLALEGFDWASVQTDGLKV
VLEGEAASEALRFKALAAAGQIVEAARVIDNFTITDSRPPVAPKFSVEILRNDKSISLIG
LVPTKADNANFKDRVARIAGDLPVADFLETADYPVPDAWSSVISYGLLALERLERSKISI
GETQVEIEAIGESEAQKSKLLEELTRRAPADITSKIDISAPRPVITPFTLRFRITADGAS
FDACSADSPEAAVQILAAAKAAGLAEEAICRQGLGVPSPLWSKAATQAIAALAKLGGGSV
TLSDADVTLTAPAGTDPTLFDTITSRLDGDLPEVFALNPILLVAPETPEDDAAIPEMVAT
LSPEGQVQIRGPVISPRAQRTLQTFAYAVFGSEDVYLSTKLQDNLPEGWMVRSLASLAGL
SKLNSGIATVSPNAIDITGLTGRRSAKTDIAQILIDRLGDGAEFELEVTYLEELDPLARM
LNGAECVAEITDLASQNKIKFEPGSATLDGDSRDTVQAIAEVFERCLEAPIEIGGHTDSQ
GREEMNLNLSKGRAEAVLTALRGARVKLKSLTAEGYGETQPIADNGTEEGREANRRIEFS
LVTPATLEAPETQSETSDTATAEETSNE
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattattccagtgattttatctgcacttgccttcgcagctgcaggcgttggggca
tattttgccgcgggcctcactgtgtcttggattgaaaatagctcggccacggccgtcgag
aaacgcctggccttggaaggctttgactgggccagcgtacaaaccgatgggttaaaggtc
gtgttggaaggcgaagccgcctctgaggccctgcgttttaaggccttggccgcagcgggg
cagatcgttgaagccgcgcgggtgattgataatttcaccatcaccgacagccgcccaccc
gttgcgcccaaattttctgtcgaaatattgcgcaatgacaaaagtatttctctgatcgga
ttggttcccaccaaagctgataatgcgaatttcaaagaccgagtcgcgcgcatcgccggc
gatttacccgtagccgattttctcgaaaccgcagattatccggtgccggatgcctggtcc
tcggtcatatcctatggtcttttggctttggagcgattggaacgctcgaagatttcaatt
ggcgagacacaagttgaaattgaagccattggcgagtccgaagcgcaaaaatccaagctt
ttggaggagctgacccgccgcgcccctgccgatatcacctcaaagattgacatcagtgcg
ccgcgcccggtgatcacccccttcacattacggtttcgcatcaccgccgatggcgcttcc
ttcgacgcctgcagcgcagacagcccggaagccgccgtgcagattctggccgcggcaaag
gcggcgggcctggccgaagaggccatctgccggcagggtcttggtgtgccgtccccgctg
tggagcaaggcggcaacacaggccattgcggcccttgccaaactgggcggcggatctgta
accctgagcgatgccgatgtaacgctcaccgccccggccggaactgatccaaccctgttt
gacacgatcaccagccggctggacggcgatttaccagaggtctttgcgctcaatcccatc
ctattggtcgcccctgaaaccccagaagatgacgcggccatcccggaaatggtcgccacc
ctctcacccgagggccaggtacaaattcgcgggcccgtcatcagcccccgcgcgcaacgg
actctgcagacctttgcctatgcggtttttggaagtgaggatgtttacctatcaaccaag
ctgcaagacaatctgcccgaaggttggatggtgcgcagcttggcaagtttggcgggtctc
agcaaactcaactctggtattgccacagtctctcccaatgccattgacatcactgggttg
acaggccgccgctcggcaaaaaccgatattgcgcaaattttaattgatcgcctcggcgat
ggggcggagtttgagctcgaggtgacctacctagaagagctggaccctctggcccggatg
ttgaacggtgcggaatgtgtggccgaaatcaccgacttggccagtcaaaataaaatcaaa
ttcgagccaggctctgccacccttgacggcgacagccgcgacacggtgcaagccattgca
gaggtgtttgagcgttgcctcgaagctcccattgagatcggcggccataccgacagccaa
gggcgtgaggaaatgaacctcaacctcagcaagggccgcgcggaggccgtgctcacggct
ttgcgtggcgcccgtgtcaaactcaagtccttaacagcagaaggctatggggaaacccaa
cccatcgccgataacggtaccgaagagggccgagaagccaaccggcgcattgagtttagc
cttgtgacgcctgccactcttgaggcgccagaaacgcagtccgaaacatccgatacggcc
accgctgaggagaccagcaatgaatag
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