Planktomarina temperata: RCA23_c05980
Help
Entry
RCA23_c05980 CDS
T03229
Symbol
mclA
Name
(GenBank) malyl-CoA ligase
KO
K08691
malyl-CoA/(S)-citramalyl-CoA lyase [EC:
4.1.3.24
4.1.3.25
]
Organism
ptp
Planktomarina temperata
Pathway
ptp00630
Glyoxylate and dicarboxylate metabolism
ptp00660
C5-Branched dibasic acid metabolism
ptp00680
Methane metabolism
ptp01100
Metabolic pathways
ptp01120
Microbial metabolism in diverse environments
ptp01200
Carbon metabolism
Module
ptp_M00373
Ethylmalonyl pathway
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RCA23_c05980 (mclA)
00660 C5-Branched dibasic acid metabolism
RCA23_c05980 (mclA)
09102 Energy metabolism
00680 Methane metabolism
RCA23_c05980 (mclA)
Enzymes [BR:
ptp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.24 malyl-CoA lyase
RCA23_c05980 (mclA)
4.1.3.25 (S)-citramalyl-CoA lyase
RCA23_c05980 (mclA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HpcH_HpaI
C-C_Bond_Lyase
Motif
Other DBs
NCBI-ProteinID:
AII86157
LinkDB
All DBs
Position
complement(642348..643307)
Genome browser
AA seq
319 aa
AA seq
DB search
MSFRLQPTPVARPNRCQLFGPGSRVALFEKMAASAADVINLDLEDSVAPSDKDSARENII
QATHDVDWGSKTLSVRINGLDTPYWYRDVVDLLERASDRLDQIMIPKVGCASDVYAVDAL
ATAIETAKGRRKPITFEVIIESAAGLAHVEEIAASSPRLVAMSLGAADFAASMGMQTTGI
GGTQENYYMQHGESKHWSDPWHWAQAAIVAACRTHGVLPVDGPFGDFSDDAGFRAQARRS
ATLGMVGKWAIHPKQIALANEVFTPSEEAVAEARDILAAMQQAKENGEGATVYKGRLVDI
ASIKQAEVIVRQYEMINSA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttcgtttgcaacccacccctgtcgcgcgccccaaccgctgccaattgttcggc
cccggttcgcgcgtcgccctgtttgaaaaaatggcagccagtgcagcagatgtgatcaat
cttgatctcgaagacagcgtggcgcccagcgacaaagacagcgcacgcgaaaacatcatt
caagcgacccatgacgttgattggggcagcaagaccctctcggtacgaattaacggtctc
gacaccccctattggtaccgcgacgttgtggatcttttggagcgcgcctcagaccggctt
gatcaaatcatgatcccaaaggttggctgtgcctctgatgtctacgccgtcgatgccttg
gccacagccattgaaacagccaagggacgccgcaagcccatcacctttgaagtcattatc
gaaagcgccgcaggtctggcccatgtcgaagagattgccgccagctcaccgcggcttgtg
gccatgtccttgggtgcggctgattttgcggcctctatgggcatgcagaccacgggcatc
ggtggcacgcaagagaattactatatgcagcatggcgagagcaagcattggtcagatcct
tggcactgggcccaggcggctatcgtcgcggcctgtcgcacccatggggttttgccggtt
gatggaccctttggcgatttcagcgatgacgcgggtttccgtgcccaggcccgccgttcc
gccacccttggcatggttggcaaatgggcgatccatcccaagcaaatcgcactggccaat
gaggttttcaccccctctgaagaggctgttgccgaggcccgcgacattctcgctgccatg
caacaggcaaaagaaaacggcgaaggtgccacggtctataaaggccgtttggtcgatatc
gcctccatcaaacaagccgaagtgattgttcgacaatatgaaatgatcaacagcgcctaa
DBGET
integrated database retrieval system