Planktomarina temperata: RCA23_c08230
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Entry
RCA23_c08230 CDS
T03229
Name
(GenBank) TRAP transporter, 4TM/12TM fusion protein
Organism
ptp
Planktomarina temperata
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
AII86379
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Position
complement(877467..879401)
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AA seq
644 aa
AA seq
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MKDTAQIQEGVRGLLPGGWSTLSNALAALLTLMAIGWAMSFQRQIGLDLYPQQFFAAMLA
LTLALAFLTLPFRRGINRPKAPWYDVVLALISLIAVGYIAVRYPDLVLMIFSRPPELWIP
SVLIVLLTLEALRRACGWALVIIIMAFLFYALFGDLFPGRLQGRAQNWQLLAGYMAVDSN
GILGLPMSVATTIVVAFIFFGVLLGVTGGTTFFTDAAMIGMGRYRGGSMKISVLASGLFG
SISGSAVANVVGTGVVTIPMIKNDGYPAHKAGAIEAVASTGGQLMPPVMGAAAFLMAEFL
AVPYSAIVSAALIPALLYYVSLFIQADLEAAKLGIRPVSKDQIPSGRKVLTGLHFAFAFA
VLIYLLFWQRYQPERAALWAALALTITSLMIGYGGVRPSIRAVFNAFSKTGHSVVEILLI
SAASGFVIGVLNITGLSFNLTYLLVQVGGSSLIALLALSAIVCIVLGMGLPTLGVYVLLA
ALVAPALIQLGVEPIAAHLYVLYFGMMSMITPPIALAAFAAASIARAPSMATGWAAMRFG
WLAYVIPVLFVFSPALIMIGTPLAIGVAILTAGLGVWLISAALAGYFSGPLSASMRILFG
ATGVLALIPSDAFSGAGYTDALGVVLGLALMLYDVYRRRQERLT
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacaccgcgcaaattcaagagggcgttcgcggcctcttgcctggggggtggagc
acgctcagcaatgcgctggcggctctgctgaccttgatggccataggctgggcgatgtcg
ttccagcgccaaatcggtcttgatctttatcctcagcaattctttgcggcgatgttggct
ttgactttggcattggcgtttttgacgctgccgttcagacgtggcataaaccgcccaaag
gcgccctggtacgatgtggtactggctttgatcagcttgattgccgttggatatattgca
gtgcgttatcctgacctggtgttgatgattttctcacgcccaccagagctttggatcccc
agcgtgctcattgttctattgacgctcgaagccctgcggcgcgcctgtggatgggcttta
gtcatcatcattatggctttcctgttttacgctttatttggcgatctcttccccggaaga
cttcagggccgcgcacagaactggcaattgcttgcaggctatatggctgtagactcaaac
ggcatccttggcttgcccatgtctgtcgccacaaccatcgtggtcgcctttatcttcttt
ggtgttttgcttggcgtcacaggcgggactacttttttcacagatgctgcgatgattggg
atggggcgatatcgtggtggatcaatgaaaatctcagtgctcgcctctggcttgttcggt
tccatctcaggctctgccgtggcaaatgttgtgggcacaggcgttgtgacgatcccgatg
atcaagaacgatggttatcccgcgcataaggccggcgcgattgaagcggtcgcctccacg
ggcgggcaattgatgccgcctgtcatgggggctgcggccttcttaatggctgaatttctg
gcagttccatattctgcaatcgtgtcagcagcgcttatcccagcgctcctctattacgtt
tcgttgttcattcaagcggatcttgaagccgccaaacttggcattcgccccgtgtcaaag
gatcaaatcccttcagggcgaaaagtattgacgggtctgcatttcgcctttgcttttgca
gtgctgatttacctgttattttggcaacgatatcaacctgagcgcgcggcgctttgggcc
gcgcttgcgctgacaatcacatccttaatgattggttatggcggtgtgagaccaagcatc
cgggctgtgttcaacgccttttccaagacaggccattcggttgtcgaaattttgcttatt
tctgccgcaagcggctttgtcatcggcgttttgaacatcaccgggctcagcttcaacctg
acctatcttttggtgcaggtcggaggatcatccttgattgcactgctggcattatcggca
atcgtgtgcatcgtcttgggcatgggactgccgacgctcggggtctatgtcttgcttgca
gctttggtcgcgcctgcgctcattcagcttggggtcgagcccattgcggcacatctttac
gtgctctatttcggtatgatgtcaatgattaccccacccattgcactcgcagcctttgcc
gcggcctcaatcgcgagggcaccttcaatggcaacaggttgggctgctatgcgctttgga
tggttggcatatgtcataccggttctcttcgtattctcgcctgccttgatcatgatcgga
acccctttggccatcggggttgcaattttgactgcgggtctcggggtttggttgatttcg
gcggcgctggcgggatattttagcggcccgctctccgcctccatgcgcattttgtttggc
gccacaggcgttctggcgctcattccgtcagatgctttttcaggggctggttacaccgat
gcacttggcgtcgtgcttggccttgctttgatgctttacgatgtctatcgccgccggcaa
gagaggctaacatga
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