Planktomarina temperata: RCA23_c28360
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Entry
RCA23_c28360 CDS
T03229
Name
(GenBank) hypothetical protein
KO
K07793
putative tricarboxylic transport membrane protein
Organism
ptp
Planktomarina temperata
Pathway
ptp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ptp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RCA23_c28360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptp02000
]
RCA23_c28360
Transporters [BR:
ptp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RCA23_c28360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TctA
Motif
Other DBs
NCBI-ProteinID:
AII88344
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All DBs
Position
complement(3003773..3005263)
Genome browser
AA seq
496 aa
AA seq
DB search
MIENFLAGSAALFGDPFTIGIFVFGVVGGMLFGAIPGVSMLTLAAILLPFTASLEPAQGV
MLFAVIYCTGTYGGAITAILFNIPGSAENAPTAFDGYPMTQKGQSGKAVGAAVLCSAIGG
IASALVMMAATEPLANWAIRNIGPPEIFALVFFGLIVASSVGARTIWKGWMSVLIGLLIA
TIGQDPVGGINRYNFGMTDLAAGIAFIPAILGFFAVSEIFVQAEKKASGKYQAPKVSMTF
PSFIELWMHKIAVLRSILVGFFCGILPGIGATLAAFMSYGEAVRWSKNPEEFGKGKLEGV
ISAETANNAATGAAMIPLLALGLPGGALTAMMVAVFQMHDLQPGPLVFMLSPDLIWIVFA
AMFYANLSILIIGVLETKTILNLLKIPFQFLAPLILMLATTGAYIGRGLVLDVMVMFLAG
IIGYLLRRSGFSIPAIVLGLILGKIGEQNFAQGMQMVHYDLGTYFSRPICAILIAAGVIT
LASNIYRAFTSIKTKA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagaattttttagcgggttccgcagctctttttggtgatcccttcacgataggc
atcttcgtctttggcgtcgtgggcggcatgttgtttggggcaatccccggggttagtatg
ctgacacttgcggcgattttgttgccctttaccgcaagcctggaacctgcacagggcgtt
atgttgtttgcggtcatttactgtactgggacctatggcggtgcgattactgcaattttg
ttcaacattcctggatccgccgaaaatgctccaaccgcgtttgatggctaccccatgacg
caaaaaggccaatcgggaaaggctgttggcgcagccgtgttgtgttcggccattgggggc
attgcatcggccctcgttatgatggccgcaaccgaaccattagcaaattgggcgatccgc
aacattggcccgcctgaaatctttgctcttgttttctttggtctaatcgtcgcctcatcc
gttggggcgcgcaccatttggaaaggctggatgtcggtcctaatcggattgttgatcgca
accattggtcaagatccggtgggaggcatcaaccgttataattttggcatgactgattta
gccgctggtattgcgtttatccctgcgatcttggggttctttgcggtttcagaaatcttt
gttcaggctgagaagaaggccagcggtaaataccaggcacccaaagtcagcatgacgttt
ccatcttttattgaactatggatgcataaaatcgctgtgctgcgatctatcctagttggg
tttttctgtggcatcctgccgggcattggcgccacgctcgccgctttcatgagttatggc
gaagctgtgcggtggtccaaaaacccagaggagtttggcaagggtaaactagaaggggtt
atttccgcagaaaccgcaaacaacgcggcaacgggtgcggcgatgatcccgctgttggca
ttgggtctgccgggaggcgcattaaccgcgatgatggttgcggtgttccaaatgcatgat
ctgcaacctggtccattggtttttatgctgtcacctgatctgatttggattgtgtttgcg
gcgatgttctacgccaatttgtccatcctgatcattggtgttttagaaaccaaaactatt
ttgaacctattgaaaatcccattccagttcttggcaccgcttattttgatgttggccaca
acaggggcttatatcggacgtggtttggttttggatgtgatggtaatgttcctagcaggc
attattgggtatctgctgcgccgttctgggttttcgatccctgcaattgtactaggtttg
attcttggtaaaattggcgaacaaaatttcgcgcaaggcatgcagatggtgcattacgat
ttgggcacgtatttttctcgtccaatttgtgcaattttgatcgctgcaggtgtaatcact
cttgcatcaaacatctaccgcgcgtttacctcaattaagacaaaggcataa
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