Pan troglodytes (chimpanzee): 453914
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Entry
453914 CDS
T01005
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X9
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04612
Antigen processing and presentation
ptr05145
Toxoplasmosis
ptr05152
Tuberculosis
ptr05164
Influenza A
ptr05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
453914 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
453914 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
453914 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
453914 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
453914 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ptr01001
]
453914 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ptr04054
]
453914 (CIITA)
Enzymes [BR:
ptr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
453914 (CIITA)
Protein kinases [BR:
ptr01001
]
Serine/threonine kinases: Other
TAF1 family
453914 (CIITA)
Pattern recognition receptors [BR:
ptr04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
453914 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_9
CARD
Motif
Other DBs
NCBI-GeneID:
453914
NCBI-ProteinID:
XP_009428563
Ensembl:
ENSPTRG00000007761
VGNC:
13687
LinkDB
All DBs
Position
16:11193115..11263989
Genome browser
AA seq
1229 aa
AA seq
DB search
MLGERRFQALARAAALTPRAAMNNFQAILTQVRMLLSSHQPSLVQALLDNLLKEELLSRE
YHCTLLHEPDSEALARKISLTLLEKGDLDLALLGWARSGLQPPAAERGPGHSDHGGSSQC
ATMELGPLEGGYLELLNSDADPVCLYHFYDQMDLAGEEEIELYSEPDTDTINCDQFSRLL
CDMEGDEETREAYANIAELDQYVFQDSQLEGLSKDIFIEHIGPDEVIGESMEMPAEVGQK
SQKRPFPEELPADLKHWKPAEPPTVVTGSLLVGPVSDCSTLPCLPLPALFNQEPASGQMR
LEKTDQIPMPSSSSSLSCLNLPEGPIQFVPTISTLPHGLWQISEAGTGVSSIFIYHGEVP
QASQVPPPSGFTVHGLPTSPDRPGSTSPFAPSATDLPSMPEPALTSRANMTEHKTSPTQC
QAAGEVSNKLPKWPEPVEQFYRSLQDTYCAEPAGPDGILVEVDLVQARLERSSSKSLERE
LATPDWAERQLAQGGLAEVLLAAKEHRRPRETRVIAVLGKPGQGKSYWAGAVSRAWACGR
LPQYDFVFSVPCHCLNRPGDAYGLQDLLFSLGPQPLVAADEVFSHILKRPDRVLLILDAF
EELEAQDGFLHSTCGPAPAEPCSLRGLLAGLFQKKLLRGCTLLLTARPRGRLVQSLSKAD
ALFELSGFSMEQAQAYVMRYFESSGMTEHQDRALTLLRDRPLLLSHSHSPTLCRAVCQLS
EALLELGEDAKLPSTLTGLYVGLLGRAALNSPPGALAELAKLAWELGRRHQSTLQQDQFP
SADVRTWAMAKGLVQHPPGAAESELAFPSFLLQCFLGALWLALSGEIKDKELPQYLALTP
RKKRPYDNWLEGVPRFLAGLIFQPRARCLGALVGPSAAALADRKQKVLARYLKRLQPGTL
RARQLLELLHCAHEAEEAGIWQHVVQELPGRLSFLGTRLTPPDAHVLGKALEAAGQDFSL
DLRSTGICPSGLGSLVGLSCVTRFRAALSDTVALWESLRQHGETKLLQAAEEKFTIEPFK
AKSLKDVEDLGKLVQTQRTRSSSEDTAGELPAVRDLKKLEFALGPVSGPQAFPKLVRILT
AFSSLQHLDLDALSENKIGDEGVSQLSATFPQLKSLETLNLSQNNITDLGAYKLAEALPS
LAASLLRLSLYNNCICDVGAESLARVLPDMVSLRVMDVQYNKFTAAGAQQLAASLRRCPH
VETLAMWTPTIPFSVQEHLQQQDSRISLR
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgctgggtgagcggagattccaggcactggccagggcagctgccctgactccaagggct
gccatgaacaacttccaggccatcctgactcaggtgagaatgctgctctccagccatcag
cccagcctggtgcaggccctcttggacaacctgctgaaagaggagctcctctccagggaa
taccactgcactctgctccatgagcctgatagtgaggctctggccaggaagatctctttg
accctactagagaaaggagacctggacttggccctcctggggtgggcccggagtgggctg
cagcccccagcagccgagaggggccccggccacagtgaccatggtggcagctcacagtgt
gccaccatggagttggggcccctagaaggtggctacctggagcttcttaacagcgatgct
gaccccgtgtgcctctaccacttctatgaccagatggacctcgctggagaagaagagatt
gagctctactcagaacccgacacagacaccatcaactgtgaccagttcagcaggctgttg
tgtgacatggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaactggac
cagtatgtcttccaggactcccagctggagggcctgagcaaagacattttcatagagcac
ataggaccagatgaagtgatcggtgagagtatggagatgccagcagaagttgggcagaaa
agtcagaaaagacccttcccagaggagcttccggcagacctgaagcactggaagccagct
gaaccccccactgtggtgactggcagtctcctagtgggaccagtgagcgactgctccacc
ctgccctgcctgccactgcctgcgctgttcaaccaggagccagcctccggccagatgcgc
ctggagaaaaccgaccagattcccatgccttcctccagttcctcgttgagctgcctgaat
ctccctgagggacccatccagtttgtccccaccatctccactctgccccatgggctctgg
caaatctctgaggctggaacaggggtctccagtatattcatctaccatggtgaggtaccc
caggccagccaagtaccccctcccagtggattcactgtccatggcctcccaacatctcca
gaccggccaggctccaccagccccttcgctccatcagccactgacctgcccagcatgcct
gaacctgccctgacttcccgagcaaacatgacagagcacaagacgtcccccacccaatgc
caggcagctggagaggtctccaacaagcttccaaaatggcctgagccggtggagcagttc
taccgctcactgcaggacacgtattgtgccgagcccgcaggccccgatggcatcctagtg
gaggtggatctggtgcaggccaggctggagaggagcagcagcaagagcctggagcgggaa
ctggccaccccggactgggcagaacggcagctggcccaaggaggcctggctgaggtgctg
ttggctgccaaggagcaccggcggccgcgtgagacacgagtgattgctgtgctgggcaaa
cctggtcagggcaagagctattgggctggggcagtgagccgggcctgggcttgtggccgg
cttccccagtacgactttgtcttctctgtcccctgccattgcttgaaccgtccgggggat
gcctatggcctgcaggatctgctcttctccctgggcccacagccactcgtggcggccgat
gaggttttcagccacatcttgaagagacctgaccgcgttctgctcatcctagacgccttc
gaggagctggaagcgcaagatggcttcctgcacagcacgtgcggaccggcaccggcggag
ccctgctccctccgggggctgctggccggccttttccagaagaagctgctccgaggttgc
accctcctcctcacagcccggccccggggccgcctggtccagagcctgagcaaggccgac
gccctatttgagctgtccggcttctccatggagcaggcccaggcctacgtgatgcgctac
tttgagagctcagggatgacagagcaccaagacagagccctgacgctcctccgggaccgg
ccacttcttctcagtcacagccacagccctactttgtgccgggcagtgtgccagctctca
gaggccctgctggagcttggggaggacgccaagcttccctccacgctcacgggactctat
gtcggcctgctgggccgtgcagccctcaacagcccccccggggccctggcagagctggcc
aagctggcctgggagctgggccgcagacatcaaagtaccctacagcaggaccagttccca
tccgcagacgtgaggacctgggcgatggccaaaggcttagtccaacacccaccgggggcc
gcagagtccgagctggccttccccagcttcctcctgcaatgcttcctgggggccctgtgg
ctggctctgagtggcgaaatcaaggacaaggagctcccgcagtacctagcattgacccca
aggaagaagaggccctatgacaactggctggagggcgtgccacgctttctggctgggctg
atcttccagcctcgcgcccgctgcctgggagccctagtcgggccatcggcggctgccttg
gcggacaggaagcagaaggtgcttgcgaggtacctgaagcggctgcagccggggacactg
cgggcgcggcagctgctggaactgctgcactgcgcccacgaggccgaggaggctggaatt
tggcagcacgtggtacaggagctccccggccgcctctcttttctgggcacccgtctcacg
cctcctgatgcacatgtactgggcaaggccttggaggcggcgggccaagacttctccctg
gacctccgcagcactggcatttgcccctctggattggggagcctcgtgggactcagctgt
gtcacccgtttcagggctgccttgagtgacacagtggcgctgtgggagtccctgcggcag
catggggagaccaagctacttcaggcagcagaggagaagttcaccatcgagcctttcaaa
gccaagtccctgaaggatgtggaagacctgggaaagcttgtgcagactcagaggacgaga
agttcctcggaagacacagctggggagctccctgctgttcgggacctaaagaaactggag
tttgcgctgggccctgtctcaggcccccaggctttccccaaactggtgcggatcctcacg
gccttttcctccctgcagcatctggacctggatgcgctgagtgagaacaagatcggggac
gagggtgtctcacagctctcagccaccttcccccagctgaagtccttggaaaccctcaat
ctgtcccagaacaacatcactgacctgggtgcctacaaactcgccgaggccctgccttca
ctcgctgcatccctgctcaggctaagcttgtacaataactgcatctgcgacgtgggagcc
gagagcttggctcgtgtgcttccagacatggtgtccctccgggtgatggacgtccagtac
aacaagttcacggctgccggagcccagcagctcgctgccagccttcggaggtgtcctcat
gtggagacgctggcgatgtggacgcccaccatcccattcagtgtccaggaacacctgcaa
caacaggattcacggatcagcctgagatga
DBGET
integrated database retrieval system
