Pan troglodytes (chimpanzee): 460045
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Entry
460045 CDS
T01005
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain isoform X3
KO
K06238
collagen type VI alpha
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04151
PI3K-Akt signaling pathway
ptr04510
Focal adhesion
ptr04512
ECM-receptor interaction
ptr04820
Cytoskeleton in muscle cells
ptr04974
Protein digestion and absorption
ptr05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
460045 (COL6A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
460045 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
460045 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
460045 (COL6A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
460045 (COL6A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
460045 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptr04147
]
460045 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
ptr00536
]
460045 (COL6A3)
Exosome [BR:
ptr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
460045 (COL6A3)
Glycosaminoglycan binding proteins [BR:
ptr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
460045 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
460045 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
fn3
Motif
Other DBs
NCBI-GeneID:
460045
NCBI-ProteinID:
XP_001153479
Ensembl:
ENSPTRG00000013074
VGNC:
10726
UniProt:
A0A2I3RHA0
LinkDB
All DBs
Position
2B:complement(123898142..123988446)
Genome browser
AA seq
2971 aa
AA seq
DB search
MRKHRHLPLVAVFCLFLSGFPTTHAQQQQAAQDSADIIFLIDGSNNTGSVNFAVILDFLV
NLLEKLPIGTQQIRVGVVQFSDEPRTMFSLDTYSTKAQVLGAVKALGFAGGELANIGLAL
DFVVENHFTRAGGSRVEEGVPQVLVLISAGPSSDEIRYGVVALKQASVFSFGLGAQAASR
AELQHIATDDNLVFTVPEFRSFGDLQEKLLPYIVGVAQRHIVLKPPTIVTQVVEVNKRDI
VFLVDGSSALGLANFNAIRDFIAKVIQRLEIGQDLIQVAVAQYADTVRPEFYFNTHPTKR
EVITAVRKMKPLDGSALYTGSALDFVRNNLFTSSAGYRAAEGIPKLLVLITGGKSLDEIS
QPAQELKRSSIMAFAIGNKGADQAELEEIAFDSSLVFIPAEFRAAPLQGMLPGLLAPLRT
LSGTPEVHSNKRDIIFLLDGSANVGKTNFPYVRDFVMNLVNSLDIGNDNIRVGLVQFSDT
PVTEFSLNTYQTKSDILGHLRQLQLQGGSGLNTGSALSYVYANHFMEAGGSRIREHVPQL
LLLLTAGQSEDSYLQAANALTRAGILTFCVGASQANKAELEQIAFNPSLVYLMDDFSSLP
ALPQQLIQPLTTYVSGGVEEVPLAQPESKRDILFLFDGSANLVGQFPVVRDFLYKIIDEL
NVKPEGTRIAVAQYSDDVKVESRFDEHQSKPEILNLVKRMKIKTGKALNLGYALDYAQRY
IFVKSAGSRIEDGVLQFLVLLVAGRSSDRVDGPASNLKQSGVVPFIFQAKNADPAELEQI
VLSPAFILAAESLPKIGDLQPQIVNLLKSVHNGAPAPVSGEKDVVFLLDGSEGVRSGFPL
LKEFVQRVVESLDVGQDRVRVAVVQYSDRTRPEFYLNSYMNQQDVVNAVRQLTLLGGPTP
NTGAALEFVLRNILVSSAGSRITEGVPQLLIVLTADRSGDDVRNPSVVVKRGGAVPIGIG
IGNADITEMQTISFIPDFAVAIPTFRQLGTVQQVISERVTQLTREELSRLQPVLQPLPSP
GVGGKRDVVFLIDGSQSAGPEFQYIRTLIERLVDYLDVGFDTTRVAVIQFSDDPKVEFLL
NAHSSKDEVQNAVQRLRPKGGRQINVGSALEYVSRNIFKRPLGSRIEEGVPQFLVLISSG
KSDDEVDDPAVELKQFGVAPFTIARNADQEELVKISLSPEYVFSVSTFRELPSLEQKLLT
PITTLTSEQIQKLLASTRYPPPAVESDAADIVFLIDSSEGVRPDGFAHIRDFVSRIVRRL
NIGPSKVRVGVVQFSNDVFPEFYLKTYRSQAPVLDAIRRLRLRGGSPLNTGKALEFVARN
LFVKSAGSRIEDGVPQHLVLVLGGKSQDDVSRFAQVIRSSGIVSLGVGDRNIDRTELQTI
TNDPRLVFTVREFRELPNIEERIMNSFGPSAATPAPPGVDTPPPSRPEKKKADIVFLLDG
SINFRRDSFQEVLRFVSEIVDTVYEDGDSIQVGLVQYNSDPTDEFFLKDFSTKRQIIDAI
NKVVYKGGRHANTKVGLEHLRVNHFVPEAGSRLDQRVPQIAFVITGGKSVEDAQDVSLAL
TQRGVKVFAVGVRNIDSEEVGKIASNSATAFRVGNVQELSELSEQVLETLHDAMHETLCP
GVTDAAKACNLDVILGFDGSRDQNVFVAQKGFESKVDAILNRISQMHRVSCSGGRSPTVR
VSVVANTPSGPVEAFDFDEYQPEMLEKFRNMRSQHPYVLTEDTLKVYLNKFRQSSPDSVK
VVIHFTDGADGDLADLHRASENLRQEGVRALILVGLERVANLERLMHLEFGRGFMYDRPL
RLNLLDLDYELAEQLDNIAEKACCGVPCKCSGQRGDRGPIGSIGPKGTPGEDGYRGYPGD
EGGPGERGPPGVNGTQGFQGCPGQRGVKGSRGFPGEKGEVGEIGLDGLDGEDGDKGLPGS
SGEKGNPGRRGDKGPRGEKGERGDVGIRGDPGNPGQDSQERGPKGETGDLGPMGVPGRDG
VPGGPGETGKNGGFGRRGPPGAKGNKGGPGQPGFEGEQGTRGAQGPAGPAGPPGLIGEQG
ISGPRGSGGAAGAPGERGRTGPLGRKGEPGEPGPKGGIGNRGPRGETGDDGRDGVGSEGR
RGKKGERGFPGYPGPKGNPGEPGLNGTTGPKGIRGRRGNSGPPGIVGQKGDPGYPGPAGP
KGNRGDSIDQCALIQSIKDKCPCCYGPLECPVFPTELAFALDTSEGVNQDTFGRMRDVVL
SIVNDLTIAESNCPRGARVAVVTYNNEVTTEIRFADSKRKSVLLDKIKNLQVALTSKQQS
LETAMSFVARNTFKRVRNGFLMRKVAVFFSNTPTRASPQLREAVLKLSDAGITPLFLTRQ
EDRQLINALQINNTAVGHALVLPAGRDLTDFLENVLTCHVCLDVCNIDPSCGFGSWRPSF
RDRRAAGSDVDIDMAFILDSAETTTLFQFNEMKKYIAYLVRQLDMSPDPKASQHFARVAV
VQHAPSESVDNASMPPVKVEFSLTDYGSKEKLVDFLSRGMTQLQGTRALGSAIEYTIENV
FESAPNPRDLKIVVLMLTGEVPEQQLEEAQRVILQAKCKGYFFVVLGIGRKVNIKEVYTF
ASEPNDVFFKLVDKSTELNEEPLMRFGRLLPSFVSSENAFYLSPDIRKQCDWFQGDQPTK
NLVKFGHKQVNVPNNVTSSPTSNPVTTMKPVTTTKPVTTTTKPVTTTTKPVTIINQPSVK
PAAAKPAPAKPVAAKPVATKTATVRPPVAVRPAMAAKPVAAKPAAVRPPAAAAAKPVATK
PEVPRPQAAKPAATKPATTKPVVKMSREVQVFEITENSAKLHWERPEPPGPYFYDLTVTS
AHDQSLVLKQNLTVTDRVIGGLLAGQTYHVAVVCYLRSQVRATYHGSFSTKKSQPPPPQP
ARSASSSTINLMVSTEPLALTETDICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCG
GNENKFGSQKECEKVCAPVLAKPGVISVMGT
NT seq
8916 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacatcggcacttgcccttagtggccgtcttttgcctctttctctcaggcttt
cctacaactcatgcccagcagcagcaagcagcacaagactctgctgacattattttcctt
attgatggatcaaacaacaccggaagtgtcaatttcgcagtcattctcgacttccttgta
aatctccttgagaaactcccaattggaactcagcagatccgagtgggggtggtccagttt
agcgatgagcccagaaccatgttctccttggacacctactccaccaaggcccaggttctg
ggtgcagtgaaagccctcgggtttgctggtggggagttggccaatatcggcctcgccctt
gatttcgtggtggagaaccacttcacccgggcagggggcagccgcgtggaggaaggggtt
ccccaggtgctggtcctcataagtgccgggccttctagtgacgagattcgctacggggtg
gtagcactgaagcaggctagcgtgttctcattcggcctcggagcccaggccgcctccagg
gcagagcttcagcacatagctaccgatgacaacttggtgtttactgtcccggaattccgt
agctttggggacctccaggagaaattactgccgtacattgttggcgtggcccaaaggcac
attgtcttgaaaccgccaaccattgtcacacaagtcgttgaagtcaacaagagagacata
gtcttcctggtggatggctcatctgcactgggactggccaacttcaatgccatccgagac
ttcattgctaaagtcatccagaggctggaaatcggacaggatcttatccaggtggcagtg
gcccagtatgcagacactgtgaggcctgaattttatttcaatacccatccaacaaaaagg
gaagtcataaccgctgtgcggaaaatgaagcccctggacggctcggccctgtacacgggc
tctgctctagactttgttcgtaacaacctattcacgagttcagccggctaccgggctgcc
gaggggattcctaagcttttggtgctgatcacaggtggtaagtccctagatgaaatcagc
cagcctgcccaggagctgaagagaagcagcataatggcctttgccatcgggaacaagggt
gccgatcaggctgagctggaagagatcgctttcgactcctccctggtgttcatcccagct
gagttccgagccgccccattgcaaggcatgctgcctggcttgctggcacctctcaggacc
ctctctggaacccctgaagttcactcaaacaaaagggatatcatctttcttttggatgga
tcagccaacgttggaaaaaccaatttcccttatgtgcgcgactttgtaatgaacctagtt
aacagccttgatattggaaatgacaatattcgtgttggtttagtgcaatttagtgacact
cctgtaacggagttctctttaaacacataccagaccaagtcagatatccttggtcatctg
aggcagctgcagctccagggaggttcgggcctgaacacaggctcagccctaagctatgtc
tatgccaaccacttcatggaagctggcggcagcaggatccgtgaacacgtgccgcagctc
ctgcttctgctcacagctgggcagtctgaggactcctatttgcaagctgccaacgccttg
acacgcgcgggcatcctgactttttgtgtgggagctagccaggcgaataaggcagagctt
gagcagattgcttttaacccaagcctggtgtatctcatggatgatttcagctccctgcca
gctttgcctcagcagctgattcagcccctaaccacatatgttagtggaggtgtggaggaa
gtaccactcgctcagccagagagcaagcgagacattctgttcctctttgacggctcagcc
aatcttgtgggccagttccctgttgtccgtgactttctctacaagattatcgatgagctc
aatgtgaagccagaggggacccgaattgcggtggctcagtacagcgatgatgtcaaggtg
gagtcccgttttgatgagcaccagagtaagcctgagatcctgaatcttgtgaagagaatg
aagatcaagacgggcaaagccctcaacctgggctacgccctggactatgcacagaggtac
atttttgtgaagtctgctggcagccggatcgaggatggagtgcttcagttcctggtgctg
ctggtcgcgggaaggtcatctgaccgtgtggatgggccagcaagtaacctgaagcagagt
ggggttgtgcctttcatcttccaagccaagaacgcggaccctgctgagttagagcagatc
gtgctgtctccagcgtttatcctggctgcggagtcgcttcccaagattggagatcttcaa
ccacagatagtgaatctcttaaaatcagtgcacaacggagcaccagcaccagtttcaggt
gaaaaggacgtggtatttctgcttgatggctctgagggtgtcaggagcggcttccctctg
ttgaaagagtttgtccagagagtggtggaaagcctggatgtgggccaggaccgggtccgc
gtggccgtggtgcagtacagcgaccggaccaggcccgagttctacctgaattcatacatg
aaccagcaggacgtcgtcaacgctgtccgccagctgaccctgctgggagggccgaccccc
aacaccggggccgccctggagtttgtcctgaggaacatcctggtcagctctgcgggaagc
aggataacagaaggtgtgccccagctgctgatcgtcctcacggccgacaggtctggggat
gatgtgcggaacccctccgtggtcgtgaagaggggtggggctgtgcccattggcattggc
attgggaacgctgacatcacagagatgcagaccatctccttcatcccggactttgccgtg
gccattcccacctttcgccagctggggaccgtccaacaggtcatctctgagagggtgacc
cagctcacccgcgaggagctgagcaggctgcagccggtgttgcagcctctaccgagccca
ggtgttggcggcaagagggacgtggtctttctcatcgatgggtcccaaagtgccgggcct
gagttccagtacattcgcaccctcatagagaggctggttgactacctggacgtgggcttt
gacaccacccgggtggccgtcatccagttcagcgatgaccccaaggtggagttcctgctg
aacgcccattccagcaaggatgaagtgcagaacgcggtgcagcggctgaggcccaaggga
gggcggcagatcaacgtgggcagcgccctggagtacgtgtccaggaacatcttcaagagg
cccctggggagccgcattgaagagggcgtcccgcagttcctggtcctcatctcgtccgga
aagtctgacgatgaggtggacgacccggcggtggagctcaagcagtttggcgtggcccct
ttcacgatcgccaggaacgcagaccaggaggagctggtgaagatctcgctgagccccgaa
tatgtgttctcggtgagcaccttccgggagctgcccagcctggagcagaaactgctgacg
cccatcacgaccctgacctcagagcagatccagaagctcttagccagcactcgctatcca
cctccagcagttgagagtgatgctgcagacatcgtctttctgatcgacagctctgaggga
gttaggccagatggctttgcacatattcgagattttgttagcaggattgttcgaagactc
aacatcggccccagtaaagtgagagttggggtcgtgcagttcagcaatgatgtcttccca
gaattctatctgaagacctacagatcccaggccccggtgctggatgccatacggcgcctg
aggctcagaggggggtccccactgaacactggcaaggctctcgaatttgtggcaagaaac
ctctttgttaagtctgcggggagtcgcatagaagacggggtgccccaacacctggtcctg
gtcctgggtggaaaatcccaggacgacgtgtccaggttcgcccaggtgatccgttcctcg
ggcattgtgagtttaggggtaggagaccggaacatcgacagaacagagctgcagaccatc
accaatgaccccagactggtcttcacagtgcgagagttcagagagcttcccaacatagaa
gaaaggatcatgaactcgtttggaccctccgcagccactcctgcacctccaggggtggac
acccctcctccttcacggccagagaagaagaaagcagacattgtgttcctgttggatggt
tccatcaacttcaggagggacagtttccaggaagtgcttcgttttgtgtctgaaatagtg
gacacagtttatgaagatggcgactccatccaagtggggcttgtccagtacaactctgac
cccactgacgaattcttcctgaaggacttctccaccaagaggcagattattgacgccatc
aacaaagtggtctacaaagggggaagacacgccaacactaaggtgggccttgagcacctg
cgtgtaaaccactttgtgcctgaggcaggcagccgcctggaccagcgggtccctcagatt
gcctttgtgatcacgggaggaaagtcggtggaagatgcacaggatgtgagcctggccctc
acccagaggggggtcaaagtgtttgctgttggagtgaggaatatcgactcggaggaggtt
ggaaagatagcgtccaacagcgccacagcgttccgcgtgggcaacgtccaggagctgtcc
gaactgagcgagcaagttttggaaactttgcatgatgcgatgcatgaaaccctttgccct
ggtgtaactgatgctgccaaagcttgtaatctggatgtgattctggggtttgatggttct
agagaccagaatgtttttgtggcccagaagggcttcgagtccaaggtggacgccatcttg
aacagaatcagccagatgcacagggtcagctgcagcggtggccgctcacccactgtgcgt
gtgtcagtggtggccaacacgccctcgggcccggtggaggcctttgactttgacgagtac
cagccagagatgctcgagaagttccggaacatgcgcagccagcacccctacgtcctcacg
gaggacaccctgaaggtctacctgaacaagttcagacagtcctcgccggacagcgtgaag
gtggtcattcattttactgatggagcagacggagatctggctgatttacacagagcatct
gagaacctccgccaagaaggagtccgtgccttgatcctggtgggccttgaacgagtggcc
aacttggagcggctaatgcatctggagtttgggcgagggtttatgtatgacaggcccctg
aggcttaacttgctggacttggattatgaactagcggagcagcttgacaacattgccgag
aaagcttgctgtggggttccttgcaagtgctctgggcagaggggagaccgcgggcccatc
ggcagcattgggccaaagggtactcctggagaagacggctaccgaggctatcctggtgat
gagggtgggcccggtgagcgtggtccgcctggtgtgaacggcactcaaggtttccagggc
tgcccgggccagagaggagtaaagggctctcggggattcccaggagagaagggcgaagta
ggagaaattggactggatggtctggatggtgaagatggagacaaaggattgcctggttct
tctggagagaaagggaatcctggaagaaggggtgataaaggacctcgaggagagaaagga
gaaagaggagatgtcgggattcgaggggacccgggtaacccaggacaagacagccaggag
agaggacccaaaggagaaaccggtgacctcggccccatgggtgtcccagggagagatgga
gtacctggaggacctggagaaactgggaagaatggtggctttggccgaaggggacccccc
ggagctaagggcaacaagggcggtcctggccagccgggctttgagggagagcaggggacc
agaggtgcacagggcccagctggtcctgccggtcctccagggctgataggagaacaaggc
atttctggacctcggggaagcggaggtgccgctggtgctcctggagaacgaggcagaacc
ggtcccctgggaagaaagggtgagcccggagagccaggaccaaaaggaggaatcgggaac
cggggccctcgtggggagacgggagatgacgggagagacggagttggcagtgaagggcgc
agaggcaaaaaaggagaaagaggattccctggatacccaggaccaaagggtaacccaggc
gagcctgggctaaatggaacaacaggacccaaaggcatcagaggccgaaggggaaattcg
ggacctccagggatagttggacagaaaggagaccctggctacccaggaccagctggtccc
aagggcaacaggggcgactccatcgatcaatgtgccctcatccaaagcatcaaagacaaa
tgcccttgctgttatgggcccctggagtgccccgtcttcccaacagaactagcctttgct
ttagacacctctgagggagtcaaccaagacactttcggccggatgcgagatgtggtcttg
agtattgtgaatgacctgaccattgctgagagcaactgtccacggggggcccgggtggct
gtggtcacctacaacaacgaggtgaccacggagatccggttcgctgactccaagaggaag
tcggtcctcctggacaagattaagaaccttcaggtggccctgacatccaaacagcagagt
ctggagactgccatgtcgtttgtggccaggaacacatttaagcgtgtgaggaacggattc
ctgatgaggaaagtggctgttttcttcagcaacacgcccacgagagcatccccacagctc
agagaggctgtgctcaagctctcagatgcggggatcacccccttgttccttacaaggcag
gaagaccggcagctcatcaacgctttgcagatcaataacacagcagtggggcatgcgctt
gtcctgcctgcagggagagacctcacagacttcctggagaatgtcctcacgtgtcatgtt
tgcttggacgtctgcaacatcgacccatcctgtggatttggcagttggaggccttccttc
agggacaggagagcggcagggagcgatgtggacatcgacatggctttcatcttagacagc
gctgagaccaccaccctgttccagttcaatgagatgaagaagtacatagcgtacctggtc
agacaactggacatgagcccagatcccaaggcctcccagcacttcgccagagtggccgtt
gtgcagcacgcgccctctgagtccgtggacaatgccagcatgccacctgtgaaggtggaa
ttctccctgactgactatggctccaaggagaagttggtggacttcctcagcaggggaatg
acacagttgcagggaaccagggccttgggcagtgccattgaatacaccatagagaatgtc
tttgaaagtgccccaaacccacgggacctgaaaattgtggtcctgatgctgacgggcgag
gtgccggagcagcagctggaggaggcccagagagtcatcctgcaggccaaatgcaagggc
tacttcttcgtggtcctgggcattggcaggaaggtgaacatcaaggaggtatacaccttc
gccagtgagccaaatgatgtcttcttcaaattagtggacaagtccaccgagctcaacgag
gagcctttgatgcgctttgggaggctgttgccgtccttcgtcagcagtgaaaatgctttt
tacttgtccccagatatcaggaaacagtgtgattggttccaaggggaccaacccacaaag
aaccttgtgaagtttggtcacaaacaagtaaatgttccgaataacgttacttcaagtcct
acatccaacccagtgacgacaatgaagccggtgactacgacgaagccggtgaccaccaca
acaaagcctgtaaccaccacaacaaagcctgtgactattataaatcagccatctgtgaag
ccagccgctgcaaagccggcccctgcaaaacctgtggctgccaagcctgtggccacaaag
acggccactgttagacccccagtggcggtgaggccagcaatggcagcgaagcctgtagca
gcaaagccagcagctgtaagacctcccgctgctgctgctgcaaaaccagtggcgaccaag
cctgaggtccctaggccacaggcagccaaaccagctgccaccaagccagccaccactaag
cccgtggttaagatgtcccgtgaagtccaggtgtttgagataacagagaacagcgccaaa
ctccactgggagaggcctgagccccccggtccttatttttatgacctcaccgtcacctca
gcccatgatcagtccctggttctgaagcagaacctcacggtcacggaccgcgtcattgga
ggcctgctcgctgggcagacataccatgtggctgtggtctgctacctgaggtctcaggtc
agagccacctaccacggaagtttcagtacaaagaaatctcagcccccacctccacagcca
gcaaggtcagcttctagttcaaccatcaatctaatggtgagcacagaaccattggctctc
actgaaacagatatatgcaagttgccaaaagacgaaggaacttgcagggatttcatatta
aaatggtactatgatccaaacaccaaaagctgtgcaagattctggtatggaggttgtggt
ggaaacgaaaacaaatttggatcacagaaagaatgtgaaaaggtttgcgctcctgtgctc
gccaaacccggagtcatcagtgtgatgggaacctaa
DBGET
integrated database retrieval system
