Pan troglodytes (chimpanzee): 460430
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Entry
460430 CDS
T01005
Symbol
PBRM1
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03082
ATP-dependent chromatin remodeling
ptr05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
460430 (PBRM1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
460430 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptr03021
]
460430 (PBRM1)
03036 Chromosome and associated proteins [BR:
ptr03036
]
460430 (PBRM1)
Transcription machinery [BR:
ptr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
460430 (PBRM1)
Chromosome and associated proteins [BR:
ptr03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
460430 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
460430
NCBI-ProteinID:
XP_009443877
Ensembl:
ENSPTRG00000015007
VGNC:
2500
LinkDB
All DBs
Position
3:complement(52818535..52957735)
Genome browser
AA seq
1725 aa
AA seq
DB search
MRRLAFRGAGCALVKLKKLDSMGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLS
NLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQ
KLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADD
EDDDEDGQDNQGTVTEGSSPAYLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPD
YYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKI
FYMKKAEIEHHEMAKTSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNKRAVQG
GRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNN
QGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENA
KRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKRNTHDS
EMLGLRRLSSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILE
PMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKE
LGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIF
LRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESL
IYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSL
AEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYED
AVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKERKEKLPKEIEEDKLKREEE
KREAEKSEDSSGAAGLSGLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLW
EDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYF
KLCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANA
DKGDDEKNTDNSEDSRAEDNFNLEKEKEDVPVEMSNGEPGCHYFEQLHYNDMWLKVGDCV
FIKSHGLVRPRVGRIEKVWVRDGAAYFYGPIFIHPEETEHEPTKMFYKKEVFLSNLEETC
PMTCILGKCAVLSFKDFLSCRPTEIPENDILLCESRYNESDKQMKKFKGLKRFSLSAKVV
DDEIYYFRKPIVPQKEPSPLLEKKIQLLEAKFAELEGGDDDIEEMGEEDSEVIEPPSLPQ
LQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVIKAQHPDY
SFGELSRLVGTEWRNLETAKKAEYEERAAKVAEQQERERAAQQQQPSASPRAGTPVGALM
GVVPPPTPMGMLNQQLTPVAGMMGGYPPGLPPLQGPVDGLVSMGSMQPLHPGGPPPHHLP
PGVPGLPGIPPPGVMNQGVAPMVGTPAPGGSPYGQQVGVLGPPGQQAPPPYPGPHPAGPP
VIQQPTTPMFVAPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQ
ESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAYNLENV
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atgaggagactggcttttcgaggcgctggttgtgctctggtaaagctgaagaagttggat
tccatgggttccaagagaagaagagctacctccccttccagcagtgtcagcggggacttt
gatgatgggcaccattctgtgtcaacaccaggcccaagcaggaaaaggaggagactttcc
aatcttccaactgtagatcctattgccgtgtgccatgaactctataataccatccgagac
tataaggatgaacagggcagacttctctgtgagctcttcattagggcaccaaagcgaaga
aatcaaccagactattatgaagtggtttctcagcccattgacttgatgaaaatccaacag
aaactaaaaatggaagagtatgatgatgttaatttgctgactgctgacttccagcttctt
tttaacaatgcaaaggcctattataagccagattctcctgaatataaagccgcttgcaaa
ctctgggatttgtaccttcgaacaagaaatgagtttgttcagaaaggagaagcagatgac
gaagatgatgatgaagatgggcaagacaatcagggcacagtgactgaaggatcttctcca
gcttatttgaaggagatcctggagcagcttcttgaagccatagttgtagctacaaatcca
tcaggacgtctcattagcgaactttttcagaaactgccttctaaagtgcaatatccagat
tattatgcaataattaaggagcctatagatctcaagaccattgcccagaggatacagaat
ggaagctacaaaagtattcatgcaatggccaaagatatagatctcctcgcaaaaaatgcc
aaaacttataatgagcctggctctcaagtattcaaggatgcaaattcaattaaaaaaata
ttttatatgaaaaaggctgaaattgaacatcatgaaatggctaagacaagtcttcgaatg
aggactccatccaacttggctgcagccagactgacaggtccttcacacagtaaaggcagc
cttggtgaagagagaaatcccactagcaagtattaccgtaataaaagagcagtacaagga
ggtcgtttatcagcaattacaatggcacttcaatatggctcagaaagtgaagaagatgct
gctttagctgctgcacgctatgaagagggagagtcagaagcagaaagcatcacttccttt
atggatgtttcaaatcctttttatcagctttatgacacagttaggagttgtcggaataac
caagggcagctaatagctgaacctttttaccatttgccttcaaagaaaaaataccctgat
tattaccagcaaattaaaatgcccatatcactacaacagatccgaacaaaactgaagaat
caagaatatgaaactttagatcatttggagtgtgatctgaatttaatgtttgaaaatgcc
aaacgctataatgtgcccaattcagccatctacaagcgagttctaaaattgcagcaagtt
atgcaggcaaagaagaaagagcttgccaggagagacgatatcgaggacggagacagcatg
atctcttcagccacctctgatactggtagtgccaaaagaaaaaggaacactcatgacagt
gagatgttgggtctcaggaggctatccagtaaaaagaacataagaaagcagcgaatgaaa
atcttattcaatgttgttcttgaagctcgagagccaggttcaggcagaagactttgtgac
ctatttatggttaaaccatccaaaaaggactatcctgattattataaaatcatcttggag
ccaatggacttgaaaataattgagcataacatccgcaatgacaaatatgctggtgaagag
ggaatgatagaagacatgaagctgatgttccggaatgccaggcactataatgaggagggc
tcccaggtttataatgatgcacatatcctggagaagttactcaaggagaaaaggaaagag
ctgggcccactgcctgatgatgatgacatggcttctcccaaactcaagctgagtaggaag
agtggcatttctcctaaaaaatcaaaatacatgactccaatgcagcagaaactaaatgag
gtctatgaagctgtaaagaactatactgataagaggggtcgccgcctcagtgccatattt
ctgaggcttccctctagatctgagttgcctgactactatctgactattaaaaagcccatg
gacatggaaaaaattcgaagtcacatgatggccaacaagtaccaagatattgactctatg
gttgaggactttgtcatgatgtttaataatgcctgtacatacaatgagccggagtctttg
atctacaaagatgctcttgttctacacaaagtcctgcttgaaacacgcagagacctggag
ggagatgaggactctcatgtcccaaatgtgactttgctgattcaagagcttatccacaat
ctttttgtgtcagtcatgagtcatcaggatgatgagggaagatgctacagtgattcttta
gcagaaattcctgctgtggatcccaactttcctaacaaaccaccccttacatttgacata
attaggaagaatgttgaaaataatcgctaccgtcggcttgatttatttcaagagcatatg
tttgaagtattggaacgagcaagaaggatgaatcggacagattcagaaatatatgaagat
gcggtagaacttcagcagttttttattaaaattcgtgatgaactctgcaaaaatggagag
attcttctttcaccggcactcagctataccacaaaacatttgcataatgatgtggagaaa
gagagaaaggaaaaattgccaaaagaaatagaggaagataaactaaaacgagaagaagaa
aaaagagaagctgaaaagagtgaagattcctctggtgctgcaggcctctcaggcttacat
cgcacatacagccaggactgtagctttaaaaacagcatgtaccatgttggagattacgtc
tatgtggaacctgcagaggccaacctacaaccacatatcgtctgtattgaaagactgtgg
gaggattcagctggtgaaaaatggttgtatggctgttggttttaccgaccaaatgaaaca
ttccacctggctacacgaaaatttctagaaaaagaagtttttaagagtgactattacaac
aaagttccagttagtaaaattctaggcaagtgtgtggtcatgtttgtcaaggaatacttt
aagttgtgcccagaaaacttccgagatgaggatgtttttgtctgtgaatcacggtattct
gccaaaaccaaatcttttaagaaaattaaactgtggaccatgcccatcagctcagtcagg
tttgtccctcgggatgtgcctctgcctgtggttcgcgtggcctctgtatttgcaaatgca
gataaaggtgatgatgagaagaatacagacaactcagaggacagtcgagctgaagacaat
tttaacttggaaaaggaaaaagaagatgtccctgtggaaatgtccaatggtgaaccaggt
tgccactactttgagcagctccattacaatgacatgtggctgaaggttggcgactgtgtc
ttcatcaagtcccatggcctggtgcgtcctcgtgtgggcagaattgaaaaagtatgggtt
cgagatggagctgcatatttttatggccccatcttcattcacccagaagaaacggagcat
gagcccacaaaaatgttctacaaaaaagaagtatttctgagtaatctggaagaaacctgc
cccatgacatgtattctcggaaagtgtgctgtgttgtcattcaaggacttcctctcctgc
aggccaactgaaataccagaaaatgacattctgctttgtgagagccgctacaatgagagc
gacaagcagatgaagaaattcaaaggattgaagaggttttcactctctgctaaagtggta
gatgatgaaatttactacttcagaaaaccaattgttcctcagaaggagccatcacctttg
ttggaaaagaagatccagttgctagaagctaaatttgccgagttagaaggtggagatgat
gatattgaagagatgggagaagaagatagtgaggtcattgaacctccttctctacctcag
cttcagacccccctggccagtgagctggacctcatgccctacacacccccacagtctacc
ccaaagtctgccaaaggcagtgcaaagaaggaaggctccaaacggaaaatcaacatgagt
ggctacatcctgttcagcagtgagatgagggctgtgattaaggcccaacacccagactac
tctttcggggagctcagccgcctggtggggacagaatggagaaatcttgagacagccaag
aaagcagaatatgaagagcgggcagctaaagttgctgagcagcaggagagagagcgagca
gcacagcaacagcagccgagtgcttctccccgagcaggcacccctgtgggggctctcatg
ggggtggtgccaccaccaacaccaatggggatgctcaatcagcagttgacacctgttgca
ggcatgatgggtggctatccgccaggccttccacctttgcagggcccagttgatggcctt
gttagcatgggcagcatgcagccacttcaccctggggggcctccaccccaccatcttccg
ccaggtgtgcctggcctcccgggcatcccaccaccgggtgtgatgaaccaaggagtggcc
cctatggtagggactccagcaccaggtggaagtccatatggacaacaggtgggagttttg
gggcctccagggcagcaggcaccacctccatatcccggcccacatccagctggaccccct
gtcatacagcagccaacaacacccatgtttgtagctcccccaccaaagacccagcggctt
cttcactcagaggcctacctgaaatacattgaaggactcagtgcggagtccaacagcatt
agcaagtgggatcagacactggcagctcgaagacgcgacgtccatttgtcgaaagaacag
gagagccgcctaccctctcactggctgaaaagcaaaggggcccacaccaccatggcagat
gccctctggcgccttcgagatttgatgctccgggacaccctcaacattcgccaagcatac
aacctagaaaatgtttaa
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integrated database retrieval system
