Pelosinus sp. UFO1: UFO1_0447
Help
Entry
UFO1_0447 CDS
T03211
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
puf
Pelosinus sp. UFO1
Pathway
puf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
puf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UFO1_0447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puf03019
]
UFO1_0447
03400 DNA repair and recombination proteins [BR:
puf03400
]
UFO1_0447
Enzymes [BR:
puf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UFO1_0447
Messenger RNA biogenesis [BR:
puf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UFO1_0447
DNA repair and recombination proteins [BR:
puf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UFO1_0447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AIF50008
UniProt:
A0A075KCP5
LinkDB
All DBs
Position
complement(530551..532680)
Genome browser
AA seq
709 aa
AA seq
DB search
MLDAALKILKQHYGYTTFRPGQEKIITSLLQKKDTLAIMPTGAGKSLCFQIPALLLPGTT
LVVSPLISLMKDQVDALNSVGIPATFINSSLSASVVSERIYNAKCGRYKIIYIAPERLEA
ESFQTAIKSLTISLLAIDEAHCVSQWGHDFRPSYRAVGSFIRSLPKRPIIGAFTATATTD
VTQDIKNLLTLQKPDIYMTGFDRENLSFTVIRGENKADFTLNYINTNKDQSGIIYAATRK
EVDNLYSQLHKKGYSVGKYHAGLPDNERQRFQEDFIYDNISIMVATNAFGMGIDKSNVRY
VIHYNMPKNMEAYYQEAGRAGRDGEPSECILLFGAQDPLLQRYLIEQTTFDTERKTNELN
KLQTMVDYCHTPECLRKFILNYFGETNTTAECANCSNCNDDNELTDITLDAQKIFSCVMR
VKERYGTTIIASVLKGSKDKKVLQLGFDSLSTYGLLKNYTLPEIRDAINRLIATDYLALT
DSEYPVVKLAPKGIAVLKNQTKVWQKVPTRAKKITTDNSLFDLLRSLRKQIADREQIPPY
LVFADSTLKEMSEYCPTTYEALLTIKGVGESKRKRYGDEFLEVMQQYAAMNSIKPTVLPT
ETKQGTSKSQEHPSHVVSLELYQSGRSLDEISQIRGLKSLTVQDHLVRCYQEGHIVNWDA
LIPPQYENLILSKIAELGAEKLKPLKDALPEEIDYAAIKAVLCKYNAIK
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgttagatgccgccctaaaaatattaaagcaacactatggctataccaccttccgccct
ggacaagaaaaaataatcaccagtctattacaaaagaaagataccttagctattatgcct
acaggagcgggcaaatctctctgctttcaaatccccgccttattattaccaggcaccacc
ttagttgtatcacccttaatttccctcatgaaagaccaagtagatgccttaaacagcgta
ggtattcctgccacatttattaatagttctcttagtgcttctgttgtcagtgagcgtatt
tataatgcaaaatgtggtcgctacaaaattatctatattgctcccgaacgcctagaagct
gaaagtttccagactgctattaaatctctgacgatatccttattagccattgacgaagcc
cactgtgtctcacaatggggacatgattttcgccctagttatcgggctgtcggttctttt
atccgttctttgcctaagcgccccattattggcgcctttacagcaactgctactacagat
gtaacccaagatatcaaaaacttattgaccttacaaaaacctgatatttatatgacaggc
tttgaccgtgagaatttatcttttaccgtcatacgtggtgaaaataaagcggacttcacc
ttaaactatattaacaccaacaaagaccaatcaggaattatttatgctgctacccgtaaa
gaagtagataatctttatagccaattacacaaaaagggttattctgtgggaaaatatcat
gctggactccctgataacgagcggcaacgtttccaggaagacttcatttatgacaatatt
agtattatggtcgccaccaatgcttttggtatgggaattgacaagtccaatgtacgttat
gttatacattataatatgcccaaaaacatggaggcctattatcaagaagctggtcgtgca
ggacgagatggcgagcctagtgaatgtattcttttattcggtgcccaagatccgttatta
caaagatacctaattgaacaaaccacttttgatacggaacgcaaaaccaatgaactaaac
aaattgcaaacgatggtggattattgtcatacccctgaatgcctaagaaaatttatttta
aactactttggcgagacaaatactacagcagaatgtgccaattgcagtaactgcaatgat
gataatgagcttacagatatcaccttagatgcacaaaagattttttcttgtgtcatgcgg
gttaaagaacgttatggtacaaccataattgctagtgttttaaaaggttctaaagataaa
aaagttctgcaactaggttttgatagcttatctacttatggtctattgaagaactatacc
ctaccagaaattcgcgatgcgattaaccgtttaatcgccactgattacttagcgttaacg
gatagtgaatatcctgtagtaaaactagcacctaaaggaattgctgtattaaaaaaccaa
acaaaggtatggcagaaagttccaacccgtgctaaaaagattacaaccgataattccctc
tttgacttattacgcagcctaagaaagcaaattgctgatagagagcaaataccaccttat
ctagtattcgctgatagcaccctaaaggaaatgagcgagtattgtccaacaacgtatgag
gccctgctgacaatcaaaggggtgggagaaagcaaacgaaaacgttatggtgatgaattt
ttggaagtcatgcaacaatatgcagctatgaatagcataaaaccaaccgttttgcctact
gaaacgaaacagggcactagcaagagtcaagaacatccgagtcatgtagttagtcttgaa
ctttatcaaagtggccgttcactagatgaaatcagtcaaattcgtggtcttaaatctctt
acagtacaagatcatctcgtacgctgctatcaggaaggacatatcgtaaattgggatgct
ctcatcccacctcaatatgaaaatctaattcttagtaaaatagcagaattaggtgctgaa
aaattaaaaccccttaaagatgctctgccagaagaaatcgactatgctgccataaaagca
gtactctgtaaatataatgctataaagtaa
DBGET
integrated database retrieval system
