KEGG   Pelosinus sp. UFO1: UFO1_2618Help
Entry
UFO1_2618         CDS       T03211                                 

Definition
(GenBank) DNA polymerase LigD, ligase domain protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
puf  Pelosinus sp. UFO1
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:puf00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    UFO1_2618
Enzymes [BR:puf01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     UFO1_2618
DNA repair and recombination proteins [BR:puf03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     UFO1_2618
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
2749862..2750842
Genome map
AA seq 326 aa AA seqDB search
MQFIKPMLAKQGKLPTDDNQYGFEIKWDGMRCILYHINNEIVLRSRNQKDITSQYPELQE
LGTILNGQQVILDGEIIVLDTNGRPSFSLLQHRMGLSSPIVIAKKRQEIPVTYISFDILY
LNNKYLMDLPYTERRHILDKLELSSTNLQVPAYQLGNGKEIQKAVSDLGLEGIIAKRLIS
HYLPGKRSDDWLKIKNNHRQEFVIGGWLPGKGQRSEGIGSLVLGYYDMTPKQAEVENKEP
QFLYAGKVGTGFTKDLLQKLLAMLTPLKRDSSPFSTDIPPKDTVFVEPQIIGEFEFTEWT
PNNTLRHPSFKGLRYDKAASFVIKES
NT seq 981 nt NT seq  +upstreamnt  +downstreamnt
atgcagtttataaaacccatgttagcaaaacaaggtaaactacccacggatgacaatcaa
tatggtttcgaaattaaatgggatggcatgcgctgcattctctaccatataaataacgaa
attgtattaagaagccgcaatcaaaaagatattacatctcaatatccggaactccaagaa
ttaggaacaatactgaacggacagcaagtgatactcgatggggagattattgtcttagat
acaaatggacggccatccttttctttattacaacatcgaatgggccttagctcccctatt
gtcattgctaaaaaaaggcaggagatacctgtaacttatatttccttcgatatactttac
ctcaacaataaatatttaatggaccttccctatacagagcgacgccacatacttgataaa
ctagaactttctagtacaaatttgcaggttccagcttatcaattaggaaatggcaaagaa
atacaaaaggccgtttctgatctaggtttggaaggaattatagccaaacggcttattagt
cattatttacctggcaaacgaagtgacgattggttaaagataaaaaataaccatcgtcaa
gaattcgtaattggtggttggttaccaggcaaaggtcaacgctctgaaggtatcggttca
ttagtattaggctattacgatatgacacctaagcaagcagaagttgaaaataaagagcca
caatttctctatgctggtaaggtaggtaccggtttcactaaagatctactccaaaagttg
ttagctatgttaactcctcttaagcgagatagtagtcccttttccactgatatcccccca
aaagacacagtctttgttgagccccaaataatcggtgagtttgaatttaccgagtggacg
ccaaataacactctccggcacccttcttttaaaggcctgcgttacgataaagcggcatcc
tttgtaataaaagaaagttaa

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