Parachlamydia acanthamoebae: PUV_05610
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Entry
PUV_05610 CDS
T01552
Symbol
sctD, cdsD
Name
(GenBank) type III secretion integral inner membrane ring protein
Organism
puv
Parachlamydia acanthamoebae
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Yop-YscD_cpl
FHA
T2SSB
Yop-YscD_ppl
Ubiquitin_5
Motif
Other DBs
NCBI-ProteinID:
CCB85511
UniProt:
F8KX44
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Position
607446..609773
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AA seq
775 aa
AA seq
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MSAKLIAEDGLLKGLALSLNMGDQWVIGRDPDECQLLVEDPEASRKHAICRKTPEGITLE
NLSTTNPVQVNNQEIKAPYLLHEGDSIKIGSGTFRFHVGTDADTPESNSVDVPDVTQHVK
ELKEDLLDEEPEEEDAAESVSSEHQEPSEPPISQEAKPDQSAVTPQSAQDLVAEDGAPLE
SQPEQVEQPDELPAAAHSESSEEQAATPKEESPEQSDQEPQAEQKVEEPEAAESEHQEEP
VASAEKEETKPLESSEKEEHKEEPVETPMSIPSEVVTPSHEEKSLPEQSVDDEPETFTAE
DTLFDEDEGGSLAEINFGLEESGRWMLKVIGGPNNGAEFSLQPSSSYVIGTDPNACDVVF
HDTSVSRTHAKITIDDQDNLFIEDLKSRNGTLVDGEPLKERRPLETNVVVTMGTTSFIIF
DREGEMHTIISPLLPSIVKVLQREEEKPAPQPDVVSEESPVAEVPPAPELKKSDKSAHAL
SAFILIAIITGLFALVGMGIATLFQSKPVERQEVADSDKKIEEALSMFPSVKHSYNTSTG
RLLLVGHVLTGVDRNQLLYNLQGLPFIKSLDDSGIVIDEYVWKEINQVLTRNPLWKGVTV
HAPTAGHFVLSGYLETRKQAEQLSDYLSSNFPYLDLLEKKVIVEEDVVSNVTFQLQSHGM
RDVKVAMHEGQLTLTGNVDPKNLKNYDVLVDGFMKIPGIRSVQNLVAERAPASAIENITS
QYRVSGFSSQGNTISVVINGRILQTNDVLDGMTIKEIRSHMIILEKDGKKYRIDF
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaaagttgattgcagaagatggattgcttaaagggctagccctttccctgaat
atgggtgatcaatgggtgattgggcgtgacccagatgagtgccagcttttggtggaagat
ccagaggcttcgcgtaagcatgctatttgccgcaaaactccagaaggcattaccctggag
aatcttagcaccacaaatcccgtacaagttaataatcaagaaattaaggctccttatctt
ttgcatgagggagacagcattaaaattggaagtggcacttttcgctttcacgttggaacg
gatgctgatactccggagtctaattcggttgatgttccagatgtgactcaacacgttaaa
gagctcaaagaagatttgttagatgaagagccggaagaagaggacgccgccgagtccgta
tcatctgagcatcaggaaccaagtgaacctcctatttcgcaagaggctaagcccgatcaa
agtgctgtaactcctcagtcagctcaagatcttgtcgctgaagatggcgcacctctagaa
tcgcagccagaacaagttgaacagcctgacgaattacctgctgcagcacactcagaatca
tcagaggaacaggcagcaacgccaaaagaggaatcgccagagcaatcggatcaggagcca
caggctgagcaaaaagtagaagagcctgaagctgccgaaagcgagcatcaagaagaaccg
gttgcatcagctgaaaaagaagagacaaaaccattagaatcttcagaaaaagaagaacat
aaagaagaaccagtagaaacacctatgagtattccaagcgaagtagtaaccccaagtcat
gaagaaaaaagtttgcctgagcagtctgtagatgatgagcctgaaacttttacagcagaa
gataccctttttgatgaagatgaagggggctcgcttgccgagattaattttggtttggaa
gaatctggccgctggatgctcaaagtcattggaggtcctaataacggggcagaattctct
cttcaaccttccagtagttatgtaattggaacagatcctaatgcatgcgatgttgtcttt
catgatacaagtgtttctcgaacgcatgctaaaattacgattgatgatcaagataatctt
tttatagaagatcttaaaagtcgcaatggaacgctcgttgatggagagcctcttaaagaa
agaagacctcttgagacaaatgtggttgttacgatgggaacaacgtcgttcatcattttt
gacagagaaggggaaatgcataccattatctctcctttgctgccttctatagtgaaagtt
ctgcaaagagaagaagaaaagcccgcacctcaaccagatgtcgtttctgaagaatctcct
gttgctgaagttcctcctgctccagagctaaaaaaatcagataaatccgcacatgcttta
agcgcttttattttaattgccattattacaggtctttttgcattggttggcatgggaatt
gcaactctatttcaaagtaagcctgttgaaaggcaagaagtcgcagattccgataaaaag
attgaggaagcattatccatgttcccaagtgtcaagcattcctataatacgtcaactggc
agattgcttcttgttggacatgttttgacaggggttgatcggaaccaacttttatataat
ctacaggggttgcccttcattaaaagtttagatgattctggcattgtaattgatgaatat
gtatggaaagaaattaaccaggtgttaacacgcaatcctctttggaaaggtgtgactgta
catgcaccgacagctggtcactttgttttatcgggttatttggaaacgcgtaagcaagcc
gagcaattgtcggattacctgagctctaactttccctatttggacctcttagagaaaaaa
gtgattgtggaagaggatgtggtttcaaatgtgacattccaattgcaaagccatggaatg
cgagatgttaaagtagcgatgcatgaagggcagctcactttgactgggaatgtggatcct
aaaaatttgaagaattacgatgtgttagtcgatggttttatgaaaattcctggaattcgg
tccgtgcaaaacttggttgcagaaagagcccctgcgagtgcgattgaaaacatcacaagc
caataccgagtaagtgggttttctagccaaggcaataccatcagtgtggttattaatggc
cgtattctccaaacgaacgacgttttggatggaatgaccattaaagagattagatcgcat
atgattattcttgaaaaagatgggaaaaaataccgaattgatttctag
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