KEGG   Parachlamydia acanthamoebae: PUV_08760
Entry
PUV_08760         CDS       T01552                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
puv  Parachlamydia acanthamoebae
Brite
KEGG Orthology (KO) [BR:puv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:puv03032]
    PUV_08760 (topA)
   03400 DNA repair and recombination proteins [BR:puv03400]
    PUV_08760 (topA)
Enzymes [BR:puv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     PUV_08760 (topA)
DNA replication proteins [BR:puv03032]
 Prokaryotic type
  DNA Topoisomerases
   PUV_08760 (topA)
DNA repair and recombination proteins [BR:puv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      PUV_08760 (topA)
SSDB
Motif
Pfam: Topoisom_bac zf-C4_Topoisom SWIB Toprim Zn_ribbon_recom PcfK Zn_Tnp_IS1
Other DBs
NCBI-ProteinID: CCB85826
UniProt: F8KY91
LinkDB
Position
974917..977511
AA seq 864 aa
MAKALIIVESPAKIKTLKKFLGPNYIFESSIGHIRDLPEKEFGIDVDHDFEPKYVIMPDK
EKVIANLRKAAKSVDTVYLSPDPDREGEAIAWHITQILPDSTKIKRVSFNSITKEAVVKA
LESPREIDFALVNAQQARRLLDRIVGYKISPILNRRIQRGKEGFVSAGRVQSVALKMVVD
REKAIEVFKPVEYWNLAAILKTKEELKNFRASLHSIAGKRIEKEPIEGKDVVIIDSKEKA
DAILAKMKSQSFYVVKVERKEKKRNPVPPFITSTLQQEASRHYGFSSARTMNIAQTLYEG
VDLGNEGSEGLITYMRTDSVRIAPEALAEARQFILNKYGKDFLPSEARNYSTSKSAQDAH
EAIRPTNLAHPPEHLKDYLTREQFLLYELIWKRFVASQMTPAIYDTVSADISAGEEILLR
ATGSVMKFQGFLVLYEEKEDDEDKNEERMLPHLEEGQLLQLIELTSEQAFTRPPPRFTEA
SLVKELEKCRIGRPSTYATIMNKIQSRDYTIKESGRLKPTELGMVIVNMLENNFQEIMNV
GFTASMEDGLELIAENQQDWKGLIRDFWLKFVPTLEEAEKSAFVPKVMTDIDCPSCGAKL
QKVWSKSKYFYGCSRYPDCNYSAPIEEISFNKDDYAEDFDWDQKCPDCQSDMKVRHGRFG
AFLGCTRYPDCRGIVNIPKKGEVVIPAAEMPACVAIDCPGHMVARKSRFGKTFYSCSTFP
ECDVIVNELSQLQEKYHNHPRTAYVKKAGKGKKEATKKRAASSTKKATTSKKAAAPKEKK
ASTRQQPLQDLSPELAQVVGANEMSRGDVMKKVWDYIRAHQLQDSANKRQINPDATLAKV
FGGPEPMDMFKMTAVLGKHIHKKQ
NT seq 2595 nt   +upstreamnt  +downstreamnt
atggctaaagccttgatcatcgtagagtcacctgcgaaaatcaaaaccttaaagaaattt
ctcggaccaaactatatatttgagtcatccattgggcatattcgagacttacctgaaaaa
gagtttggaatcgatgttgatcacgactttgagcctaagtatgtcattatgccagacaaa
gagaaggtcatcgctaatttgcgcaaggccgccaaaagtgtcgatacggtctatctttct
cctgaccctgaccgcgaaggagaagcaattgcttggcatatcactcaaattttgcctgat
tcgacaaaaattaaacgggtgtcctttaattcgattacgaaagaagctgtagttaaagcg
ctcgaatcyccgcgtgaaattgatttcgctttagtgaatgcacagcaggcgcgtcgttta
ttagaccggattgtgggatataagatttcgcccattttaaatcgaaggattcagcgtggt
aaagaaggttttgtttctgctggtcgagttcaatcagttgctttaaaaatggttgtcgat
cgggagaaagcgattgaagtttttaaacctgtggaatactggaatttagccgccattctc
aagacaaaagaagagcttaagaatttccgcgccagtctgcattccattgcaggaaaacgg
attgaaaaggaacctattgaggggaaagacgttgttatcattgacagcaaagagaaagca
gacgcgatcttagccaagatgaaatcgcagtctttctatgtcgtaaaagtggaacgcaaa
gagaaaaaacgcaacccagttcctccttttattacatccacactgcaacaggaagccagt
cgtcactatggattttcttcggctagaaccatgaatatcgcacaaaccttgtacgaaggt
gtggatcttggcaatgaaggttctgaaggtttgattacttatatgcgtacagactccgtg
cgtattgctccagaggctttagctgaggcgcgtcagtttattttaaataaatatggaaaa
gattttctaccttcagaggcacgtaattattccacaagtaaaagtgctcaagatgcccac
gaagcgattcgaccaaccaacctggcgcatcccccagaacatytgaaagattatctaaca
cgcgaacagtttttgctatacgaactcatttggaaacgttttgtggcttcccaaatgaca
cctgctatttatgatactgtttctgcagacatttcagcgggagaggaaattttactgcgg
gcgacaggatctgtgatgaaattccaaggctttcttgtcctttatgaggaaaaagaagac
gacgaagataaaaatgaagagcgaatgttgccgcatttagaagaggggcaattattgcag
cttattgagttgacttccgagcaagcctttacgcgtccacccccacgctttacggaagct
tctttagttaaagaattggaaaaatgtcgcattggaagaccatctacgtacgcgaccatt
atgaataagattcagagtcgagattacaccatcaaggaaagcggtcgtttaaagccaacc
gaactcggcatggtgatcgtgaacatgttggaaaataattttcaagaaatcatgaatgtt
ggatttaccgcttccatggaagatggattagagcttattgcggaaaatcagcaagattgg
aaaggattgattcgagatttttggttgaaatttgttcctaccttagaagaagctgaaaag
tctgcttttgtgccaaaagtgatgacagatatcgattgccctagttgcggtgcgaagttg
caaaaagtttggtcgaagtcgaaatacttctatggttgttcccgttatcctgactgtaat
tattcggcccctattgaagagatctcttttaacaaagatgattatgcagaagattttgac
tgggatcaaaaatgtccagattgtcagtctgacatgaaagttcggcatggccgttttggt
gcatttttaggatgcacccggtatccagattgtagaggtattgttaacattcctaaaaaa
ggggaagtcgtgattcctgcggcagaaatgcctgcttgcgtcgcaattgattgtccgggt
catatggtcgcacgtaaatcccgttttgggaaaacattctactcttgctccacgtttcct
gaatgtgacgttattgtaaatgagctgtctcaattgcaagagaaataccataatcatcca
cgtacggcttatgtgaagaaagcgggaaaagggaaaaaagaagccaccaaaaaacgcgca
gcttcttcaaccaaaaaggctactacatctaaaaaagcagcagcaccgaargagaaaaag
gcgtcaaccagacagcaacctttgcaagatctttctccagagctcgcgcaagttgtgggt
gcaaatgaaatgtcacgtggcgatgtgatgaaaaaagtgtgggattatattcgcgctcat
caattgcaagactctgccaataaaagacagatcaatccggatgcgacgctagccaaagtg
tttggtggacctgagccgatggatatgtttaaaatgacagcagttttgggcaaacacatt
cacaagaaacaataa

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