Pantoea vagans C9-1: Pvag_1433
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Entry
Pvag_1433 CDS
T01326
Symbol
hrpA
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent helicase HrpA [EC:
3.6.4.13
]
Organism
pva
Pantoea vagans C9-1
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Pvag_1433 (hrpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
T2SSE
PhoH
nSTAND3
AAA_23
HA2_N
NACHT
AAA_30
ResIII
SLFN-g3_helicase
ABC_tran
NAD_binding_9
TsaE
Motif
Other DBs
NCBI-ProteinID:
ADO09623
UniProt:
E1SE42
LinkDB
All DBs
Position
complement(1508071..1511973)
Genome browser
AA seq
1300 aa
AA seq
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MSSPDTSPLAALWPRLDGVMLRDRQRLQRRLQGARKAKNPEAQQGIARELEQEFIAAEQR
VAQRRAATPAITFPDNLPVSQKQQDIAAAIRDNQVVIVAGETGSGKTTQLPKICLALGRG
ITGLIGHTQPRRLAARSVANRIADELSTSLGGCVGYKVRFNDQVSDLTQIKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLRELLPRRPDLKVIITSATIDPQRFSRH
FNNAPVIEVSGRTYPVEVRYRPVVEEADDGDRDQLQAIFDAVDELGRESRGDILIFMSGE
REIRDTADALNKRDLPHTEVLPLYARLSNAEQNRVFQSHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSFRTKVQRLPIEPISQASANQRKGRCGRVSDGICIRLYSEDDFLSR
PAFTDPEILRTNLASVILQMTSLGLGDIAAFPFVEAPDKRNIQDGVRLLEELGALTLNEE
SGHYKLTGSGRQLAQLPVDPRLARMVLEAQKFGCVREVMIITAGLSIQDPRERPAEKKQA
SDEKHRRFADKDSDFLAYVNLWNYLAEQQKALSGNLFRRQCKSDFLNYLRVREWQDIYTQ
LRQVVRELGIPVNSEPAELQPVHCALLSGLLSHIGQKDTDKQEYTGARNTRFSIFPGSGL
FKKPPKWAMVAELVETSRLWGRTAGRIEPEWIEPLAQHLIKRSYSEPHWEKSQGAVMAAE
KVTLYGLPIVAARKVNYGSIDPTLSRELFIRHALVEGDWQTRHAFFRANQKLRSEVEDLE
HKSRRRDILVDDETLFAFYDQRIGKEVVSAKHFDSWWKKASRENAELLNFDKQMLIKEGA
DKVSQLDYPNFWHQGNLKLKLSYQFEPGADADGVTVHIPLPLLNQIEDSGFEWQIPGVRR
ELIISLIKSLPKPLRRNLVPAPNYAEAFLGRVNAMEMPLPDALSREFRRMTGVTLERENW
QWEQVPDHLKMTFRVVDEHNRKLLEGKDLTALKAQLKGKVQETLSKVADDGLEQSGLHIW
SFGELPRSYEQKRGSYQVKAWPALVDEKESVAIRLFDSEQEQQKMMWRGQRRLLLLNVPS
PVKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIACGIDKLMGEAGGPAWDQTSFEQLRDK
VRGELNETVVTIAKQVEQILTAVFNINKRLKGRVDMTMALALSDIKAQLSGLVYRGFVTG
NGWQRLADTLRYLHGIERRLEKLPADPHSDRARMLKVQAVEQAYQAWRNKLPPQRQDDEE
VKNIRWMIEELRISYFAQQLGTPYPISEKRILQTMEQIAG
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcccgatacttccccactggcagcgctctggccacggctcgacggtgtcatg
ctgcgcgatcgccagcgtctgcagcgccgcttgcagggtgccagaaaagctaaaaatccc
gaggcacagcagggcattgcccgcgagctggagcaggaatttattgctgctgaacagcgc
gtggcccagcgccgcgcggcaacgccagccataaccttcccggacaatctgccggtcagt
cagaagcagcaggatattgcggcggcgattcgcgacaatcaggtggtgattgttgcgggt
gaaaccggttcaggtaaaaccacgcagctgccgaaaatctgtctggcgctaggacgcgga
atcacgggtctgattggacatacccagccgcgtcgtctggctgcgcgcagtgtggcgaat
cgcattgctgatgagctcagtacctcactgggcggctgtgtcggctataaggtgcggttt
aacgaccaggtcagcgacctgacgcagattaaactgatgaccgacggtatcctgctggcg
gagatccagcaggatcgcctgctgatgcaatatgacaccatcatcattgatgaggcgcac
gagcgcagcctgaatatcgatttcctgctcggttatctgcgtgagctgctgccgcgccgc
cccgatctgaaagtgattattacctcggcgaccatcgatccgcagcgcttctcgcggcac
ttcaacaacgcgccggtgattgaagtttccggccggacttacccggtcgaagtgcgctac
cggccggtggttgaagaagcggatgatggcgatcgcgatcagctgcaggcgatatttgat
gcggtggatgagctgggacgcgagagtcgcggcgatattctgattttcatgagcggtgag
cgcgaaatccgcgacaccgccgatgcgctgaacaaacgcgacctgccgcacaccgaagtg
ctgccgctctatgcgcgactgtcgaacgccgaacagaaccgggtatttcagtcgcacagt
ggccgtcgcatcgtgctggcgaccaacgtggcggaaacttcactgacggtgcctgggatc
aaatatgttatcgatccaggcacggcacgtatcagtcgctacagcttccgcaccaaggtg
cagcgcctgccgattgagccgatatcgcaggcctccgccaaccagcgaaaagggcgttgc
ggccgtgtttcagacggtatctgtattcgtctctactcggaagatgacttcctgagccgt
ccggcctttaccgatccggaaatcctgcgtaccaacctggcatcggtgatcctgcagatg
acctcgctgggactcggcgatatcgctgctttcccgtttgtggaagcgcccgataagcgc
aacattcaggatggcgtccgcctgctggaagagctgggtgcgctgaccctgaatgaggag
agcggacactacaaactcaccggctccggtcgtcagctggcacagttgccggtcgatccg
cgtctggcacgaatggtgctggaagcgcagaaatttggctgcgtgcgtgaagtgatgatc
atcaccgccggtctgtcgattcaggacccgcgcgagcgcccggcagagaaaaagcaggcg
tccgatgagaagcaccggcgctttgccgacaaagactccgacttcctcgcctatgtgaac
ctctggaactacctagcggagcagcagaaagccctgtcgggcaaccttttccgccgccag
tgcaaaagcgacttcctgaactatctgcgcgtacgggaatggcaggatatttatacccag
ctgcggcaggtagtgcgtgaactgggcattccggttaacagtgaaccggctgagctgcag
cccgttcactgcgcgctgctcagcggtctgctgtcgcacatcggtcagaaggacaccgac
aagcaggagtacaccggcgcacgcaatacccgcttctcgattttcccgggttccgggctg
tttaagaagccgccgaagtgggccatggtggcagaactggttgaaaccagccgcctgtgg
ggccgcacggcggggcggattgagccggagtggattgagccgctggcgcagcacctgatc
aagcgcagctacagtgaaccacactgggagaaatcgcagggcgcggtaatggctgccgag
aaggttacgctctatggcctgccgattgtggccgcccgcaaggtgaactatggtagcatt
gatcccactctgagccgtgagctgtttatccgtcacgcgctggtggagggcgactggcag
acgcgtcacgccttcttccgtgctaaccagaagctgcgcagtgaagtcgaagatctggaa
cacaaatcccgccgtcgcgatattctggtggatgacgaaacgctgtttgctttttatgac
cagcgcattggcaaagaggttgtctcagcgaagcatttcgacagctggtggaaaaaggcc
agccgtgaaaacgcggagctgctgaactttgacaaacagatgctgatcaaagagggcgcg
gataaggtcagccagcttgattaccctaacttctggcatcagggcaaccttaaactgaag
ctgagttaccagttcgagccgggtgccgatgcggatggcgtgacggtacatattccgctg
ccgctgctgaatcagattgaagatagcggttttgaatggcagatccccggggtacgccgt
gagctgatcatctcgctgattaagtcactgcccaagccgctgcgccgcaacctggtgccg
gcacccaactacgccgaggcgttcctgggacgcgtcaacgcaatggagatgccgcttccc
gatgcgctgtcccgtgagtttcgccgcatgaccggcgtcacgctggagcgggaaaactgg
cagtgggaacaggtgcccgatcatctgaaaatgaccttccgggtggtggatgagcacaac
cgtaaactgctggaaggtaaagatctcaccgcgctcaaggcacagctgaaaggcaaggtg
caggagacgctgtcaaaagtggcagatgacgggctggagcagagcggtctgcatatctgg
agctttggtgaactgccgcgcagctacgaacagaagcgcggtagctatcaggtcaaagcc
tggcctgcgctggtcgatgagaaagagagcgtcgccattcgcctgtttgacagcgagcag
gagcagcagaaaatgatgtggcgcggtcagcgtcgtctgctgctactgaatgtgccgtca
ccggttaaatatctgcacgagaagttgccgaacaaagccaagctcggactttacttcaac
ccttatggcaaagtgctggagctgattgatgactgcatcgcctgtggcatcgacaaactg
atgggtgaagcgggcggtccggcctgggatcagacctcgtttgagcagttgcgtgacaaa
gttcgcggcgaactcaatgagaccgtcgtgaccattgcgaagcaggttgagcagatcctg
acggccgtcttcaacatcaataagcgtctcaaaggccgggtcgatatgacgatggcgctg
gcgttatctgacatcaaggcgcaattaagtggtctggtttatcgcggctttgtcaccggc
aacggctggcagcgactggcggatacgctgcgttacctgcatggcattgagcggcggctg
gaaaaactgcctgccgatccacacagcgatcgcgcgcgcatgttaaaagtgcaggcagtg
gaacaggcgtatcaggcgtggcgcaacaaattgccgccgcagcgtcaggatgatgaagag
gtgaagaacattcgctggatgattgaggagctgcgtatcagctactttgctcagcaactg
ggtacgccgtatcccatctcagagaagcgaattctgcagacaatggagcagatagcaggg
taa
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