Pectobacterium parmentieri WPP163: Pecwa_1195
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Entry
Pecwa_1195 CDS
T01106
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
3.6.4.13
]
Organism
pwa
Pectobacterium parmentieri WPP163
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pwa03009
]
Pecwa_1195
Ribosome biogenesis [BR:
pwa03009
]
Prokaryotic type
rRNA helicases
Pecwa_1195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_11
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ACX87009
LinkDB
All DBs
Position
complement(1293035..1294360)
Genome browser
AA seq
441 aa
AA seq
DB search
MTVTNFSELDLDESLLDALRDMGYERPTAIQAEAIPPAMEGRDVLGSAPTGTGKTAAYLL
PVLQHLIDFPRKKSGPPRILILTPTRELAMQVADQARAFAAHTHLDIATITGGVAYMNHA
EVFSENQDVVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLNEPIEIESDPSRRERKKILQWYYRADDLKHKTALLC
HQLKQPDVTRSIIFVRKRERVHELVSWLHEAGINSCYLEGEMVQAKRNEAIKRMSDGRVN
VLVATDIAARGIDIDDVSHVFNFDLPRTADTYLHRIGRTGRAGRKGCAISFVEAHDHLLL
GKISRYLNEPLKPRVVEELRPETKAPSAKTTGKPSKKVLAKRKEKKEKEKEKVKVKVRDR
DSKNVGKRRQPTKKTDEPSAE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaccaatttttccgagctcgatcttgatgaaagcctgttagacgccctgcgc
gatatgggttatgaacgtccaactgcgattcaagccgaggcaatccctccggcgatggaa
ggccgtgacgtactgggctctgcgccaacaggtacaggtaaaaccgccgcctatctgctg
ccggttttgcagcatcttatcgattttcctcgtaaaaaatcaggtccacctcgtattctg
atcctcacgccaactcgtgagctcgctatgcaggttgccgatcaggcgcgtgcatttgcg
gcgcatacgcatctggatatcgccacgatcactggtggcgtggcctatatgaaccacgca
gaagtgttcagcgaaaatcaggacgttgtcgtcgcgacgactggccgtctgctgcaatac
atcaaagaagaaaacttcgattgccgtgcggtagaaacactgatcctggacgaagcggac
agaatgctggatatgggcttcgcccaggatattgaacacatcgcaggggaaactcgctgg
cgcaagcaaacgatgctgttttctgcgacgttggaaggggacgcgatcaaggatttcgcc
gagcgtctgctcaacgaaccgattgaaatcgaatccgacccatcgcgtcgggagcgtaaa
aaaattctgcaatggtattaccgcgccgacgatctcaaacacaaaacagccctgctctgc
catcagttaaaacagccagatgttacgcgctctatcatctttgtacgcaagcgtgagcga
gtgcatgaactggtatcctggctgcatgaagctggcattaactcatgctatctcgaaggc
gaaatggtgcaagccaagcgcaacgaggcgatcaaacgcatgagcgacggtcgagttaac
gtgctggtggcaacagatatcgcagcgcgtggcatcgatattgacgatgtcagccacgta
tttaacttcgacttgccgcgcacagccgatacttaccttcatcgtatcggccgcaccggc
cgcgcgggtcgcaaaggctgtgctatctctttcgttgaagcgcacgatcacctgctgctg
ggaaaaatcagccgctacctgaatgagccgctaaaaccgcgcgttgtagaggaactccgt
ccagagaccaaagcgccaagcgccaaaacgacgggcaaaccgtcgaaaaaagtgctcgct
aagcggaaagagaaaaaagagaaggaaaaagaaaaagttaaagtgaaggttcgcgatcgc
gacagtaaaaatgttggtaagcgtcgtcaaccaacaaagaaaactgacgaaccgtctgct
gaataa
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