KEGG   Pyrus x bretschneideri (Chinese white pear): 103961745
Entry
103961745         CDS       T03446                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
  KO
K03129  transcription initiation factor TFIID subunit 4
Organism
pxb  Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pxb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103961745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pxb03021]
    103961745
   03036 Chromosome and associated proteins [BR:pxb03036]
    103961745
Transcription machinery [BR:pxb03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     103961745
   Coactivators
    SAGA/TFTC/STAGA complex
     103961745
Chromosome and associated proteins [BR:pxb03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     103961745
SSDB
Motif
Pfam: TAF4 RST DUF4513
Other DBs
NCBI-GeneID: 103961745
NCBI-ProteinID: XP_009372608
LinkDB
Position
Unknown
AA seq 965 aa
MDPSIMKKLLEDDEDETMHSGADVEAFQAALNRDIEGDASASQPSDSDSAILSQGSNNTS
SQPLPQFQTTGQDESTACEMQHDQKIAQPRELHSYEMELKQQGSVAENMQLKSDASQELS
HFSLSQKQPQGDLQQGQAEQKSLQVHETTGTPISGKIPVSKQEQDITPTPQSESQYLKLQ
RMSSQQSMITEQPSNPMNRSKQVPFGLLLPVLLPQLDKDRAMQLNTLFGKLKNNEISKDA
FVRHIRSVVGDQMLKLAVMKVQSQHTKTLQPGPKHQLLPQASVQQQSPRMPSASAGSTQF
ADPRSFALNQRGTNSPTDPSHIPSSTVQLQSDSSHSVIENSAKKLREAERQSDSHGMQVS
QMSSSSVVAGNQERERSSGPMQILNKQQQQLQYPQSSYSMYGSTGGNYHPYTGTSINTLP
LKQQPHDSQLRQIPQHQSMGSAQSGGEAKGGNVMGVSNLERQNSMKDPSRLQGGSLSHFT
NNSTLQQNIAPWQSSNKEPHSGPLSSIPFVKQELTDQTAEQQHKPPLSNSQELPSAAKLE
QGNGSPGISMDEPLDKQSSRMGFPASVSIGASSSTSTVPPNSVSSSITTQADPNVLLGHR
IPSGTSPAGISNRAPPKKPSVGQKKPLEALGSSPPPSSKKQKVSGTFLDQSIEQLNDVTA
VSGVNLREEEEQLFSGPKEDSRASEASRKFVQEEEERLILQKEPLQKKLAEIMIKCGLKS
VSNDVERCLSLCVEERMRGLINNLIRLSKQRVDAEKPRHRTIITSDVRQQVMNLNQNARE
EFEKKQAEAEKLRKLNEPEVSNGVDGDKDKDEGRSKSFKPNKEEDDKMRTTAANVAARAA
VGGDDMLSKWQLMAEQARQKREGGIDVASGSQPGKDVNRKPTLSAGRTMKDNQEAEKRSG
GTPVASAAGTIRKCGKNQVNVPQTKVARSISVKDVIAVLEREPQMSRSTLIYRLFERVQS
NTTGE
NT seq 2898 nt   +upstreamnt  +downstreamnt
atggacccctccattatgaagaagctgctcgaagacgatgaggacgaaaccatgcattcg
ggggcggatgtggaggccttccaggctgccctcaatagggacattgaaggagatgcctct
gcttcccagccatctgattccgactccgcgattttgtctcaaggaagcaataatacttct
agtcagccattaccacagttccaaacaactggtcaggatgaaagtacagcttgcgaaatg
caacatgaccaaaaaattgcacaaccacgagaactgcattcatatgaaatggagctaaag
caacaaggatctgttgctgaaaatatgcagctaaaaagtgatgcctcacaggaacttagt
cacttttctttgtcccagaagcaaccccaaggtgatcttcaacaagggcaagcagaacaa
aaatccctccaggtacatgaaacaactggcacgccgatttccggaaaaattcccgtctcc
aaacaggagcaggacattacacctactccgcaaagcgaatctcagtacttaaagcttcag
aggatgagcagtcaacagtcaatgatcactgagcagccaagcaacccaatgaatcgtagt
aaacaagtaccatttggcctgttactacctgtcctattgccccagcttgataaggacagg
gccatgcaacttaatactctatttggcaaactcaagaataatgaaatctcaaaagacgct
tttgttcggcacattagaagtgttgttggggaccagatgctcaaattggcagtaatgaaa
gtacaatcgcagcatacaaaaactttgcagccaggtcctaaacaccagttactgcctcag
gcttcagtgcagcaacagtctcctaggatgccatctgctagtgcaggttccacacagttc
gctgatcctcgttcatttgcacttaatcagagaggcaccaactctccgacagacccatcg
cacattccatcttcaacagttcaactgcagtctgattcaagccattcagtcattgaaaac
agtgctaaaaaactgcgggaggcagaacgtcagtcagactctcatggaatgcaagtaagc
caaatgtcttcttctagtgtggtagctgggaatcaagaaagggagcgctcatcaggtcct
atgcaaatacttaataaacagcaacaacagttgcagtatccacaatcatcctattccatg
tatggaagtactggtggtaattatcacccatatacggggacaagtatcaatacattgcct
ctcaaacagcaacctcatgattcacaacttagacaaataccacaacatcaaagcatgggt
tcagctcagtcaggtggggaagcaaagggagggaacgtcatgggtgtgtccaatttggag
aggcaaaattcgatgaaggaccctagtagactgcagggtggatctctttcgcactttaca
aataattcaactttacaacagaatatagctccttggcaatcctcaaataaagagccacat
tctggtcctttgtcatcaattccttttgtaaaacaggaactgactgatcagactgccgag
cagcagcacaaacccccattatctaattcacaggaattgccttctgctgcgaaacttgaa
caggggaatgggtcacctggaatttcaatggacgagccgttagataagcaatcttcaaga
atggggtttccagcatctgtaagcattggggcttcatcttctacaagcacagtgcccccg
aattctgtttcttcttccataacaacgcaagctgatcccaatgtcttgttaggccatcga
ataccctctggaacttctcctgctgggattagtaatagagcacctccaaaaaagccttct
gttggccaaaagaagcctcttgaagcacttggttcttccccacctccgtcaagtaagaag
caaaaggtatccgggacctttttggatcaaagcattgaacaactgaatgatgtgactgct
gttagtggagttaatcttagggaagaggaagagcagctgttttctgggcccaaggaggat
agtcgagcttcagaagcatctcgaaagtttgtgcaagaagaagaagagaggttgattttg
cagaaggaacccttgcagaaaaagttggcagaaattatgatcaaatgtggattgaaaagt
gtaagcaatgatgtggagcggtgcttgtcactgtgtgtggaggaaagaatgaggggacta
ataaataatctgatcagactgtcaaagcagcgagttgatgctgagaagccgagacaccgc
actattattacctctgatgttcggcagcaagttatgaatctcaaccagaatgccagggaa
gaatttgaaaaaaagcaagccgaggcagaaaagcttcgaaagcttaatgaacctgaggtt
agcaacggagttgatggtgataaggacaaagatgaaggtcgttcgaaatcatttaagcca
aacaaagaggaagatgacaaaatgaggacaacagcagcaaatgttgctgcccgagctgct
gttggaggagatgacatgttgtcaaaatggcaacttatggctgagcaagcccggcaaaaa
cgtgaaggtgggattgatgtagcatctgggtcccagccaggtaaagatgtaaaccgcaag
cctacattatcagctggaagaactatgaaggacaatcaagaagcagagaaaaggagcggt
ggaactcctgttgcttcagctgctgggactattagaaaatgtggaaagaaccaagttaat
gtgcctcaaacgaaggtggctcgtagtatatctgttaaggatgtgattgctgtcctagag
agagaacctcagatgtcgagatctactctgatatatcgcttgtttgagagagttcaatct
aacaccactggtgaataa

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