Pyrus x bretschneideri (Chinese white pear): 103961745
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Entry
103961745 CDS
T03446
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103961745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pxb03021
]
103961745
03036 Chromosome and associated proteins [BR:
pxb03036
]
103961745
Transcription machinery [BR:
pxb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103961745
Coactivators
SAGA/TFTC/STAGA complex
103961745
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
103961745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
DUF4513
Motif
Other DBs
NCBI-GeneID:
103961745
NCBI-ProteinID:
XP_009372608
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
MDPSIMKKLLEDDEDETMHSGADVEAFQAALNRDIEGDASASQPSDSDSAILSQGSNNTS
SQPLPQFQTTGQDESTACEMQHDQKIAQPRELHSYEMELKQQGSVAENMQLKSDASQELS
HFSLSQKQPQGDLQQGQAEQKSLQVHETTGTPISGKIPVSKQEQDITPTPQSESQYLKLQ
RMSSQQSMITEQPSNPMNRSKQVPFGLLLPVLLPQLDKDRAMQLNTLFGKLKNNEISKDA
FVRHIRSVVGDQMLKLAVMKVQSQHTKTLQPGPKHQLLPQASVQQQSPRMPSASAGSTQF
ADPRSFALNQRGTNSPTDPSHIPSSTVQLQSDSSHSVIENSAKKLREAERQSDSHGMQVS
QMSSSSVVAGNQERERSSGPMQILNKQQQQLQYPQSSYSMYGSTGGNYHPYTGTSINTLP
LKQQPHDSQLRQIPQHQSMGSAQSGGEAKGGNVMGVSNLERQNSMKDPSRLQGGSLSHFT
NNSTLQQNIAPWQSSNKEPHSGPLSSIPFVKQELTDQTAEQQHKPPLSNSQELPSAAKLE
QGNGSPGISMDEPLDKQSSRMGFPASVSIGASSSTSTVPPNSVSSSITTQADPNVLLGHR
IPSGTSPAGISNRAPPKKPSVGQKKPLEALGSSPPPSSKKQKVSGTFLDQSIEQLNDVTA
VSGVNLREEEEQLFSGPKEDSRASEASRKFVQEEEERLILQKEPLQKKLAEIMIKCGLKS
VSNDVERCLSLCVEERMRGLINNLIRLSKQRVDAEKPRHRTIITSDVRQQVMNLNQNARE
EFEKKQAEAEKLRKLNEPEVSNGVDGDKDKDEGRSKSFKPNKEEDDKMRTTAANVAARAA
VGGDDMLSKWQLMAEQARQKREGGIDVASGSQPGKDVNRKPTLSAGRTMKDNQEAEKRSG
GTPVASAAGTIRKCGKNQVNVPQTKVARSISVKDVIAVLEREPQMSRSTLIYRLFERVQS
NTTGE
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggacccctccattatgaagaagctgctcgaagacgatgaggacgaaaccatgcattcg
ggggcggatgtggaggccttccaggctgccctcaatagggacattgaaggagatgcctct
gcttcccagccatctgattccgactccgcgattttgtctcaaggaagcaataatacttct
agtcagccattaccacagttccaaacaactggtcaggatgaaagtacagcttgcgaaatg
caacatgaccaaaaaattgcacaaccacgagaactgcattcatatgaaatggagctaaag
caacaaggatctgttgctgaaaatatgcagctaaaaagtgatgcctcacaggaacttagt
cacttttctttgtcccagaagcaaccccaaggtgatcttcaacaagggcaagcagaacaa
aaatccctccaggtacatgaaacaactggcacgccgatttccggaaaaattcccgtctcc
aaacaggagcaggacattacacctactccgcaaagcgaatctcagtacttaaagcttcag
aggatgagcagtcaacagtcaatgatcactgagcagccaagcaacccaatgaatcgtagt
aaacaagtaccatttggcctgttactacctgtcctattgccccagcttgataaggacagg
gccatgcaacttaatactctatttggcaaactcaagaataatgaaatctcaaaagacgct
tttgttcggcacattagaagtgttgttggggaccagatgctcaaattggcagtaatgaaa
gtacaatcgcagcatacaaaaactttgcagccaggtcctaaacaccagttactgcctcag
gcttcagtgcagcaacagtctcctaggatgccatctgctagtgcaggttccacacagttc
gctgatcctcgttcatttgcacttaatcagagaggcaccaactctccgacagacccatcg
cacattccatcttcaacagttcaactgcagtctgattcaagccattcagtcattgaaaac
agtgctaaaaaactgcgggaggcagaacgtcagtcagactctcatggaatgcaagtaagc
caaatgtcttcttctagtgtggtagctgggaatcaagaaagggagcgctcatcaggtcct
atgcaaatacttaataaacagcaacaacagttgcagtatccacaatcatcctattccatg
tatggaagtactggtggtaattatcacccatatacggggacaagtatcaatacattgcct
ctcaaacagcaacctcatgattcacaacttagacaaataccacaacatcaaagcatgggt
tcagctcagtcaggtggggaagcaaagggagggaacgtcatgggtgtgtccaatttggag
aggcaaaattcgatgaaggaccctagtagactgcagggtggatctctttcgcactttaca
aataattcaactttacaacagaatatagctccttggcaatcctcaaataaagagccacat
tctggtcctttgtcatcaattccttttgtaaaacaggaactgactgatcagactgccgag
cagcagcacaaacccccattatctaattcacaggaattgccttctgctgcgaaacttgaa
caggggaatgggtcacctggaatttcaatggacgagccgttagataagcaatcttcaaga
atggggtttccagcatctgtaagcattggggcttcatcttctacaagcacagtgcccccg
aattctgtttcttcttccataacaacgcaagctgatcccaatgtcttgttaggccatcga
ataccctctggaacttctcctgctgggattagtaatagagcacctccaaaaaagccttct
gttggccaaaagaagcctcttgaagcacttggttcttccccacctccgtcaagtaagaag
caaaaggtatccgggacctttttggatcaaagcattgaacaactgaatgatgtgactgct
gttagtggagttaatcttagggaagaggaagagcagctgttttctgggcccaaggaggat
agtcgagcttcagaagcatctcgaaagtttgtgcaagaagaagaagagaggttgattttg
cagaaggaacccttgcagaaaaagttggcagaaattatgatcaaatgtggattgaaaagt
gtaagcaatgatgtggagcggtgcttgtcactgtgtgtggaggaaagaatgaggggacta
ataaataatctgatcagactgtcaaagcagcgagttgatgctgagaagccgagacaccgc
actattattacctctgatgttcggcagcaagttatgaatctcaaccagaatgccagggaa
gaatttgaaaaaaagcaagccgaggcagaaaagcttcgaaagcttaatgaacctgaggtt
agcaacggagttgatggtgataaggacaaagatgaaggtcgttcgaaatcatttaagcca
aacaaagaggaagatgacaaaatgaggacaacagcagcaaatgttgctgcccgagctgct
gttggaggagatgacatgttgtcaaaatggcaacttatggctgagcaagcccggcaaaaa
cgtgaaggtgggattgatgtagcatctgggtcccagccaggtaaagatgtaaaccgcaag
cctacattatcagctggaagaactatgaaggacaatcaagaagcagagaaaaggagcggt
ggaactcctgttgcttcagctgctgggactattagaaaatgtggaaagaaccaagttaat
gtgcctcaaacgaaggtggctcgtagtatatctgttaaggatgtgattgctgtcctagag
agagaacctcagatgtcgagatctactctgatatatcgcttgtttgagagagttcaatct
aacaccactggtgaataa
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integrated database retrieval system