KEGG   Paracoccus yeei: A6J80_22380Help
Entry
A6J80_22380       CDS       T04781                                 

Definition
(GenBank) DNA ligase D
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
pye  Paracoccus yeei
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pye00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    A6J80_22380
Enzymes [BR:pye01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     A6J80_22380
DNA repair and recombination proteins [BR:pye03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     A6J80_22380
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
unnamed5:complement(135327..137864)
Genome map
AA seq 845 aa AA seqDB search
MALETYRKKRDFSATPEPEGRAGKTGGRSFVIQKHDATRLHYDFRLEMDGVLKSWAVTKG
PSLDPSEKRLAVHVEDHPLDYGDFEGTIPKGQYGGGTVIVWDRGTWSPIGDAEKAYAKGH
MEFELHGEKLSGRWHLVRMRGKSGEKRDNWLLIKGDDDQARTEGDILEERPESVKTGRQI
AEVAEGVEKPARKPATRKADARKPAPRKDAPRKDAPRKAAAKDAGTPAVKGAKRGALPDF
VPPMLATLVSSAPSGKEWLHEIKFDGYRLQARVEDGAVRLLTRSGLDWSERFGDGVLKAL
AALPVKTALIDGELVVEAGSGASDFSALQADLSEGRSDRFVFYAFDLMHLDGMDLRGAAL
AERKALLQPLLAEAPDTLRYSDHFAESGDMVLQHACQLSLEGIVSKLADSPYRAGRGKAW
VKSKCSARQEFVIGGYVPSMVSPKLIGSLVLGVHQGGTLRHVGRVGTGFSAAVAADLFRR
LEPMTRKTSPFDGKLTATEARQVRYVEPELVAEVEFRAWTADGHLRHAAFRGLREDKPAA
EIVREEPKAGAKPAAPPRRTVRLTHPDRIYWPDAGVTKEGLADYYAEVWRHIAPHVVGRP
LALLRCPGGIDGQRFFQKHAWKGLNPRIVQVRDPKDKAGEPLIAIEDLDGLMGLVQAAAL
EIHPWGSTLASWEKPDQIVMDLDPGEGVPWTRVIEAALEIRQRLKDAGLASFVKTSGGKG
LHVVAPLKPQATWPTVKSFTKALADSMAKDDPDRYVATVAKSKRQGKILIDYLRNQRGAT
AVAAYSTRARPGAPVSTPLDWDELGPDIGPAHFTVANLPARLAALTDNPWGGFRAAAVPL
PTRKR
NT seq 2538 nt NT seq  +upstreamnt  +downstreamnt
atggcgctggagacctatcgcaagaagcgcgatttttccgcgacccccgagcccgagggc
cgcgcgggcaagaccggcggccgcagcttcgtcatccagaagcacgatgcgacccggctg
cattacgatttccggcttgagatggacggggtgctgaaaagctgggccgtgaccaaggga
ccatcgctcgaccccagcgaaaagcggctggccgtccatgtcgaggaccacccgttggac
tatggcgatttcgagggcacgattcccaagggccaatatggcggcggcaccgtgatcgtc
tgggaccgcggcacctggtcgcccatcggcgacgctgaaaaggcctatgccaagggccat
atggaattcgagctgcatggcgaaaagctgtccgggcgctggcatctggtcaggatgcgc
ggcaagtccggcgagaagcgcgacaactggctgctgatcaagggcgacgacgaccaggcc
cggaccgaaggcgacatccttgaggaacgtccggaatccgtcaagaccggccgccagatc
gccgaggtggccgagggcgtcgaaaagcccgcgcgcaagcctgccacccgaaaggccgac
gcacgcaagcctgccccgcgcaaggatgccccgcgcaaggatgccccgcgcaaggctgcg
gcaaaggacgcaggcacgcccgccgtcaagggcgccaagcgcggcgcgctgcccgatttc
gtgccaccgatgctggccacgctggtttcctcggccccttcgggaaaggaatggctgcac
gagatcaagttcgacggctatcgccttcaggccagggtcgaggatggcgcggtccgcctg
ctgacgcgcagcggactcgactggtcggaacgcttcggggacggcgtgctgaaggccctg
gccgccctgccggtcaagacggcgctgatcgacggcgagctggtggtcgaagccggctcc
ggcgcctcggacttttcggcgctgcaggcggatctgagcgaggggcgcagcgaccgcttt
gtgttctacgccttcgacctgatgcatctggacgggatggatctgcgcggcgccgcgctg
gccgagcgcaaggccctgctgcagccgctgctggccgaggccccggatacgctgcgctac
agcgaccatttcgccgaaagcggcgacatggtgctgcaacatgcctgccagctgagcctg
gaagggatcgtctcgaagctggccgacagcccgtatcgcgcgggacggggcaaggcctgg
gtcaaatcgaaatgctcggcccggcaggaattcgtgatcggcggctatgtcccctcgatg
gtgtcgcccaagctgatcggatcgctggtgctgggcgtgcatcagggcggcacgctgcgc
catgtgggccgcgtcggcacgggcttttccgccgccgtggccgcggacctgttccggcgg
ctggaacccatgacgcgcaagaccagcccctttgacggcaagctgaccgcgaccgaggcc
cggcaggtccgctatgtcgaacccgaactggtggccgaggtcgagttccgcgcctggacc
gccgacggccacctgcgccacgccgcctttcgcgggctgcgcgaggacaagcccgcggcc
gagatcgtgcgcgaggaaccgaaagcgggcgcaaaacccgcggcacccccacgccgcacg
gtgcgcctgacccatcccgaccgcatctactggcccgacgccggtgtcaccaaggagggg
ctggccgattactatgccgaggtctggcgccacattgccccccatgtcgtcggccgcccg
ctggcgctgctgcgctgcccaggcgggatcgacgggcagaggttctttcagaagcacgcc
tggaaggggctgaaccccaggatcgtgcaggtcagggaccccaaggacaaggcgggcgag
cccctgatcgccatcgaggacctggacgggttgatggggctggtccaggccgccgcgctg
gaaatccacccctggggttcgacgctggccagttgggaaaagccggaccagatcgtcatg
gacctggacccgggcgagggcgtgccctggacccgggtgatcgaggccgcgctggaaatc
cgccagcgcctgaaggatgcgggactggcatccttcgtcaagacctcgggtggcaagggg
ctgcatgtggtggcgccgctgaagccgcaggcgacctggcccacggtcaagagctttacc
aaggctctcgccgacagcatggccaaggatgaccccgaccgctatgtcgcgaccgtcgcc
aagtccaagcggcagggcaagatcctgatcgattatctgcgcaaccagcgcggagcgacg
gccgttgcggcctattcgacacgggcgcggcccggcgcgccggtctcgacgccgctggat
tgggacgaactcggccccgacatcggaccggcgcatttcacggtagcgaatctgcccgcc
cggctggccgcgctgacagacaatccgtggggcgggttccgcgccgcagccgtcccgctg
cccacccgcaagcgctag

DBGET integrated database retrieval system