Pyrococcus sp. NA2: PNA2_1203
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Entry
PNA2_1203 CDS
T01487
Name
(GenBank) putative deah atp-dependent helicase
Organism
pyn
Pyrococcus sp. NA2
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
NOV_C
ResIII
DEAD
SWI2_SNF2
ERCC3_RAD25_C
HAD_2
Frigida
AAA_34
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
AEC52118
UniProt:
F4HNB4
LinkDB
All DBs
Position
1104930..1107824
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AA seq
964 aa
AA seq
DB search
MNLPEAILREFLLHSPDLFYLSLARPGRRKIRPFLHQLQPLYHAMVHRPIRIFIADEIGL
GKTIQALAIARYLNLKGEAKRILILVPKILREQWREEIERIGVRPIVIESGEEVEEKLKR
DGFFVVSIDLAKMYSHREKFLRKDWDLVIVDEAHNVTIGTQRYDFVKELIGRREDLNVIF
LSATPHRGDSKDYLARLLLLDPTLVDDYQRLDSPEFYRRTMGTIVFRRTKQLVNKLEGKE
IFKRCHFRAVVVGITEEEKEYFRKLNDVLYDLIKNAQKNSPIALLAILVNKRASSSYSSA
MKTLSKIVESHYLKREANPERVQEYIEKLFGLGYDDIDLESFSEYDEIVEKIIGEYSAVL
REKQVKEFKELLDLLKRIRVDSKIEVVANIVKNHVEKGEKVIVFTEFKDTLEYLRSKLSR
LVGLNEDEVSILHGGMSSDKIREEIRKFERNGKLLISTDVASEGLNLQIASVLINYEAPW
TPIKIEQRVGRVWRIDQEKDVKAYTIFLDTEVDMYVLNNLYERIMNIREVLGEGPRIGLP
VPGERILEGDFETLWKDIPEEFESGEKVSEYDIGYAILRRDIEGYRKAILNTLKILRQNI
RGAVLQERIESIRRDLEAIADERIEEIVKRYVRELMGKNVPDVSPILHRIMLSGDEFRKG
LRVGVKKGKGELFSIKLVRNGKELHRFPIMVVDGEVIYGAKLLERLIDILKDGYVILGDS
ESHSSYEARVITIGRDVIYKVREKYKRYDRWLKRKGLKRGNLFAETMIIPEKVIEFEPIG
DKLEIAKIIPIQVLELLNFSEDDVSLPTRNDLMLLERNFVPLEDILRAERKAMEIVIEIE
KKRMREKYGDVGWEVRDVSLHEHYDVLVRTPEGEKYIEVKGHLPFLLQAELTEAEVRFAR
EHEENYWLYIVANLRKRPVILKIFKPFSNPRVLLVKDGEDVDVTKLVKANVREKGRFLFS
LTSS
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
ttgaacttacccgaggcaatcctgagggagttcctcctgcactccccagacctcttttac
ctatcccttgcgaggcctgggaggaggaagataaggcctttccttcaccaacttcaaccc
ctttaccacgccatggttcataggccaattaggattttcatagctgatgagatcgggctg
ggaaaaacgattcaagcccttgcaatagctagataccttaaccttaagggggaggctaag
aggatcttaatactcgttccaaagatactgagggagcagtggagggaggagattgagagg
atcggtgtaagaccaatagtcatcgagagtggggaggaagtcgaggagaagcttaagagg
gatggcttcttcgtggtttccatagaccttgcaaagatgtacagtcacagggagaaattc
cttaggaaggattgggatctggttatagtggacgaggcccacaacgtgacgattggaacc
caaaggtacgatttcgtgaaggaactcatcggtaggagggaggacctgaacgtaatattc
ctctcagcaacgccccacaggggggattccaaggactaccttgcaagactcttactcctc
gatcccacccttgtagatgactatcaaaggcttgactcaccggagttctacaggagaacc
atggggactatagtattcaggaggacgaagcagttggtgaacaagcttgagggtaaggag
atattcaagaggtgccactttagggcagttgtcgttggaataaccgaggaggagaaggag
tactttaggaagttaaatgacgttctgtacgatctcatcaagaacgcccagaagaattcg
ccgatagcccttttagcaattctcgtgaataaaagggcatcttccagctactcctccgcc
atgaagacgctcagtaagatagttgagagccactacttgaaaagggaggcaaatccggaa
agggttcaggagtacatagagaagctctttggtcttgggtacgatgacattgaccttgag
agcttttcggagtacgatgagatagttgagaagataattggggagtactcggctgttctt
cgagagaagcaggttaaagagtttaaggagctacttgaccttctcaagaggataagggtc
gacagtaagatcgaggtcgtggcaaacatcgttaagaatcacgttgagaagggtgagaag
gttatagttttcacggagttcaaggacacgctcgagtaccttaggagcaaactctctaga
ttagtgggattgaatgaggacgaagtttcaattctgcatgggggaatgtcctcggataaa
attagggaagaaattagaaagttcgagaggaatgggaagttgttgatctctacagatgtt
gcctcggaggggctgaaccttcagatcgcgagtgttctaataaactacgaggctccctgg
acgccgataaagatcgagcagagggtcggtagggtttggaggatagatcaggagaaggat
gttaaggcctacaccatatttctcgacaccgaggttgacatgtacgttctcaacaacctc
tacgagaggataatgaacattagggaagttcttggagaagggcccaggatcggattacca
gttccaggggagaggatactcgagggggacttcgaaaccctatggaaggacatccccgaa
gagttcgagagtggcgagaaggtgagcgaatacgacatagggtacgccatacttaggagg
gatatagaaggatatagaaaggccatcttgaacacgttaaagattctgaggcagaacata
aggggggccgttcttcaggagagaatcgagagtataaggagggaccttgaagcgatagcc
gatgaaaggattgaggagatagtgaaaagatacgttagagagttgatggggaagaacgtt
cccgatgtatctccgatactccacaggattatgttgagtggtgacgagtttagaaaaggg
cttagggttggagttaagaaaggaaagggagagcttttctccattaagctcgtaaggaat
ggaaaagaactgcacaggttccctatcatggtggttgacggagaggtcatctatggggct
aagctacttgagaggctaatagacatcctcaaggatgggtacgtaattctaggcgattcc
gaatcccattcgagctacgaggctagggtgataacaataggtagagacgtgatatacaag
gttcgcgagaagtacaagaggtacgatagatggctcaagaggaaagggctgaagaggggt
aacttattcgccgaaacgatgataattccagagaaggttattgagtttgagcccataggg
gacaagctagagatcgccaagataatccccattcaggtgctcgagcttttgaacttctcg
gaggacgatgttagcttaccaacgaggaacgatcttatgcttctcgagaggaactttgtc
cccttggaggatatccttagagctgaaaggaaggcgatggaaattgtaattgagatcgag
aagaaaaggatgagggagaagtatggagacgttggatgggaagttagagatgtgtcactc
cacgagcactacgacgtgctagttaggactcccgagggtgagaagtacattgaggtcaag
ggtcatcttccgttcctccttcaagccgaactcacagaagctgaggttaggtttgcgagg
gagcacgaggaaaattattggctctacatagttgcaaacttgaggaagaggccagttatc
ttaaagatttttaaacccttcagcaatccaagggtgctactcgttaaagatggggaggac
gttgatgttacgaaattagtcaaggcaaatgtgagggagaagggaaggtttttgttctca
ttgacatcgagttaa
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