Pyrococcus sp. NA2: PNA2_1505
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Entry
PNA2_1505 CDS
T01487
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
pyn
Pyrococcus sp. NA2
Pathway
pyn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pyn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PNA2_1505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pyn03019
]
PNA2_1505
Messenger RNA biogenesis [BR:
pyn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PNA2_1505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RMMBL
Lactamase_B
Lactamase_B_2
DUF3562
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AEC52420
UniProt:
F4HJC4
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All DBs
Position
1384488..1385810
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AA seq
440 aa
AA seq
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MIKIYTLGGYEEVGKNMTAVEYDGEVIIIDMGIRLDRVLIHEDVEFQKMSSKELRKLGAI
PDDRPIRDKKVVAIALSHGHLDHIGAVGKLAPHYPDVPIYGTPYTIRLAKSEIKSEQYFE
VTNPLYETNYGEIVQVSENLAIEFVQITHSIPHSSIVVIHTPEGAVVYACDYKFDNNHPY
GERPDYKRLKELGKEGVKVLIAESTRVAEETKTPSEAVAKMLLEDFFLYEGMDADGLIAT
TFASHIARLQELIEIANKMGRQAIFIGRSLAKYTGIAKQLGLIKMKGSRVLRSPNAISKV
LKEVSQARENYLLIVTGHQGEPGAILTRMANGELYDIGSRDTVVFSAGVIPNPLNVAQRY
ALETKLRMRGVRMIKNLHVSGHASKEDHRYLIRMLNPEYIVPAHGEFRMLTHYAELAEEE
GYMIGKDVFISRNGHRIEID
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgataaagatctacacgcttggtggttatgaggaagttgggaagaacatgacggccgtt
gaatacgatggcgaggtgataataatagatatgggcattaggcttgatagggttctcatt
catgaggatgttgagtttcaaaagatgagctccaaggagctaaggaagctcggggcaatc
ccagacgataggcctataagagacaaaaaagttgtggcaatagctctctctcatggacac
ttagatcatataggtgccgttggaaaacttgccccccattatcccgatgttcccatatat
gggactccctacacgataagacttgcgaaaagtgagataaagagtgaacaatattttgaa
gtgacgaaccccttatatgagacaaattatggggagatagtccaggtaagtgaaaacctc
gccatagaatttgttcaaataactcattctattcctcattcttcgatagttgttattcac
acccccgaaggggcagttgtctatgcctgtgattataagttcgacaataaccatccatat
ggcgagagaccagactataaacgactaaaggagcttggaaaggaaggggttaaagtattg
attgctgaatcaactagggtagccgaggagacaaagactccaagtgaggcagttgcaaag
atgctccttgaggatttctttctttacgagggaatggatgctgatggactaatagctaca
acatttgccagtcatatcgctagacttcaggagctgatagagatagcgaacaagatgggt
cgtcaagcaatttttatagggagatctctggctaagtacactggaatagccaagcaactc
gggttaataaagatgaagggatctagagtgctcaggagcccgaatgcaattagcaaagtt
ctcaaagaggtctctcaagctagggaaaattatttactaatagtcaccggacaccaggga
gaaccgggagctatattgactaggatggccaatggcgaactttacgatataggatcaaga
gatacagttgtgttttcagcgggtgtcataccgaatcccctgaatgtagcccaaaggtat
gccttggagaccaagcttagaatgagaggagtgaggatgataaagaaccttcacgtttct
ggacacgcaagtaaggaggatcataggtatcttattagaatgctcaatccagagtacata
gttcccgctcatggagaatttagaatgttgactcactatgctgagcttgcggaggaagag
ggttacatgataggtaaggatgtattcatttcaaggaacggccacaggattgaaattgac
tag
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