Rahnella aceris Y9602: Rahaq_4065
Help
Entry
Rahaq_4065 CDS
T01422
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
rah
Rahnella aceris Y9602
Pathway
rah03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Rahaq_4065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rah03400
]
Rahaq_4065
DNA repair and recombination proteins [BR:
rah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rahaq_4065
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Rahaq_4065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_23
nSTAND3
AAA_25
AAA_21
NACHT
Viral_helicase1
cobW
ScfRs
MeaB
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
ADW75653
UniProt:
A0A0H3FF38
LinkDB
All DBs
Position
4422051..4424906
Genome browser
AA seq
951 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHNIPLSAQTVSQMVDNVLAQPEGQRLMLLATIIKDRKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLAQRLAESFETALELSGGTAVVADMDDP
KAEEMLFSANFACPVCGYSMRELEPRMFSFNNPAGACPTCDGLGVQQFFDPDRVVQNPEL
SLAGGAIRGWDRRNFYYFQMLRSLGEHYDFDVEAPFNELSSDVQNAILHGSGKTTIEFKY
INDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELSKYISNRPCTSCSGTRLREEARN
VFVEETTLPEISDFSIGHAMDFFRNMKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRDLGNT
VIVVEHDEDAIRAADHIIDIGPGAGVHGGEVVAEGTAEDIMATENSLTGQFLSGKREISV
PAQRVPADATKVLKLSGAKGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPLAQR
ELNGATIAEAAPYREIEGLGHFDKVIDIDQSPIGRTPRSNPATYTGIFTPVRELFAGVPE
SRSRGYTPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKSIHEVLEMTIEEARDFFDAVPALARKLQTLIDVGLTYISLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLEVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGAGGGQILVAGTPETVAECKESHTARFLKPLLERHSQQAKKSA
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcgaagttcggggcgcacgcacccataatctcaagaatatcaacctgatt
atcccgcgcgacaaactgattgttgtcaccggcttatccggttcaggcaagtcctctctg
gcgttcgatacgctgtacgccgaaggccagcgccgctacgtcgagtcgctgtcggcctac
gcacgccaatttttatccttaatggaaaaaccagacgtcgaccatattgaaggtctgtct
ccggcgatttcgattgagcaaaaatcaacgtcgcacaacccgcgctctaccgtcgggacc
atcaccgaaatccacgactacctgcgcctgctgtttgcccgcgtgggcgagccgcgctgc
ccggatcataatattccgctgtcagcccagaccgtcagccagatggtggataacgtactg
gcacagccggaaggccagcgtctgatgctgctggcgaccatcattaaagatcgcaaaggc
gagcataccaagacgctggaaaacctggcgtcgcagggctatatccgtgcgcgtattgat
ggtgaagtgtgtgatttgtccgatccgccaaaattagaattgcagaagaaacacaccatt
gaagtggtcgttgaccgctttaaagtgcgtgacgatctggcgcaacgcctggcggaatcg
tttgaaaccgcgctcgagctttccggtggtaccgccgtggtcgccgatatggatgacccg
aaagccgaagaaatgctgttctcggccaactttgcctgtccggtgtgcggctacagcatg
cgcgagcttgaaccgcgtatgttctcgttcaacaacccggcgggagcctgtccgacctgt
gacgggctgggtgtgcagcagttcttcgaccctgatcgcgtggtgcaaaaccctgagctt
tcactggcgggtggggctatccgcggctgggatcgtcgtaacttctattatttccagatg
ctgcgctctcttggtgagcattatgatttcgacgtggaagcgccgtttaacgaactgagc
agcgacgtgcaaaacgccatcctgcacggttccggcaaaaccaccattgaattcaaatac
attaacgatcgcggtgatacttcgattcgtcgccatccgtttgaaggcgtactgcacaat
atggagcgccgttataaagaaacggaatccagcgcagtacgtgaagaactgtcgaaatac
atcagcaaccgtccgtgtacttcctgcagcggcacccgcctgcgtgaagaagcccgtaac
gtatttgtcgaagaaaccacgctgccggaaatctctgatttcagcatcggccatgcgatg
gatttcttccgcaatatgaaactcagcggtcagcgcgccaaaattgctgagaaagtgctg
aaagagattggcgatcgcctgaaattcctggtgaacgtcggcctgaattacctctcgctg
tcacgttctgcggaaacgctgtccggcggcgaagcccagcgtatccgtctggcgagccag
attggtgccggtctggtgggcgtgatgtacgtgctggatgagccgtctatcggcctgcat
cagcgcgacaacgagcgtctgctggaaaccctgatccacctgcgcgacctcggtaacacg
gtgattgtggtcgagcacgacgaagacgcgatccgcgctgccgaccatattattgatatt
ggtccgggtgcaggcgtacacggtggcgaagtggtggctgaaggcaccgctgaagacatt
atggcgaccgagaattcactgaccggccagttcctgagcggtaaacgggaaatctccgta
ccggcgcagcgcgtcccggcggatgccaccaaagtgctgaaactttccggcgctaaaggc
aacaacctgaaagatgtcacgctgacgctgccggtgggcctgtttacctgtatcaccggc
gtgtccggctccggtaaatcgacgttgatcaacgacacgctgttcccgctggcacagcgc
gagctgaatggcgcaacgattgctgaagctgcgccgtaccgtgaaatcgaaggtctgggc
catttcgataaagtcatcgacatcgaccagagcccgattggccgtacgccgcgctctaac
ccggcaacctacaccggtattttcacgccggtgcgtgagctgtttgccggtgtgccggaa
tcacgttcacgcggctacacgccggggcgtttcagtttcaacgtcaaaggcggccgctgc
gaagcctgtcagggcgacggcgtgatcaaagttgaaatgcacttcctgccggatatttat
gtgccgtgcgatcagtgcaaaggcaaacgctataaccgcgaaacgctggaaattaaatac
aaaggcaagagcatccacgaagtgctggagatgaccattgaagaagcgcgtgatttcttc
gatgccgtccctgcgctggcgcgtaaattgcagacgctgatcgacgtcggtctgacctac
atcagcctcggccagtcagcgaccacgctgtccggcggtgaagcacagcgcgtcaaactg
gcgcgtgagctgtccaaacgcggcaccggtcagacgttgtatattctcgacgaaccgacc
accggcctgcactttgccgatattcagcaactgctggaagtgctgcatcagctacgcgat
cagggcaacaccatcgtggtgattgaacacaatctggacgtgattaaaaccgcggactgg
attgttgatctcgggccagaaggcggtgcgggcggcggacagattctggtcgccggtacg
ccggaaaccgtcgcggaatgcaaagaatcgcatactgcgcgcttcctgaaaccgttgctg
gaacgccacagccagcaggcgaagaaaagcgcttaa
DBGET
integrated database retrieval system