KEGG   Rahnella aceris Y9602: Rahaq_4065
Entry
Rahaq_4065        CDS       T01422                                 
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
rah  Rahnella aceris Y9602
Pathway
rah03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Rahaq_4065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rah03400]
    Rahaq_4065
DNA repair and recombination proteins [BR:rah03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Rahaq_4065
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Rahaq_4065
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 RsgA_GTPase DnaJ_CXXCXGXG AAA_23 nSTAND3 AAA_25 AAA_21 NACHT Viral_helicase1 cobW ScfRs MeaB ExoX-like_C
Other DBs
NCBI-ProteinID: ADW75653
UniProt: A0A0H3FF38
LinkDB
Position
4422051..4424906
AA seq 951 aa
MDKIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHNIPLSAQTVSQMVDNVLAQPEGQRLMLLATIIKDRKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLAQRLAESFETALELSGGTAVVADMDDP
KAEEMLFSANFACPVCGYSMRELEPRMFSFNNPAGACPTCDGLGVQQFFDPDRVVQNPEL
SLAGGAIRGWDRRNFYYFQMLRSLGEHYDFDVEAPFNELSSDVQNAILHGSGKTTIEFKY
INDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELSKYISNRPCTSCSGTRLREEARN
VFVEETTLPEISDFSIGHAMDFFRNMKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRDLGNT
VIVVEHDEDAIRAADHIIDIGPGAGVHGGEVVAEGTAEDIMATENSLTGQFLSGKREISV
PAQRVPADATKVLKLSGAKGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPLAQR
ELNGATIAEAAPYREIEGLGHFDKVIDIDQSPIGRTPRSNPATYTGIFTPVRELFAGVPE
SRSRGYTPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKSIHEVLEMTIEEARDFFDAVPALARKLQTLIDVGLTYISLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLEVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGAGGGQILVAGTPETVAECKESHTARFLKPLLERHSQQAKKSA
NT seq 2856 nt   +upstreamnt  +downstreamnt
atggataagatcgaagttcggggcgcacgcacccataatctcaagaatatcaacctgatt
atcccgcgcgacaaactgattgttgtcaccggcttatccggttcaggcaagtcctctctg
gcgttcgatacgctgtacgccgaaggccagcgccgctacgtcgagtcgctgtcggcctac
gcacgccaatttttatccttaatggaaaaaccagacgtcgaccatattgaaggtctgtct
ccggcgatttcgattgagcaaaaatcaacgtcgcacaacccgcgctctaccgtcgggacc
atcaccgaaatccacgactacctgcgcctgctgtttgcccgcgtgggcgagccgcgctgc
ccggatcataatattccgctgtcagcccagaccgtcagccagatggtggataacgtactg
gcacagccggaaggccagcgtctgatgctgctggcgaccatcattaaagatcgcaaaggc
gagcataccaagacgctggaaaacctggcgtcgcagggctatatccgtgcgcgtattgat
ggtgaagtgtgtgatttgtccgatccgccaaaattagaattgcagaagaaacacaccatt
gaagtggtcgttgaccgctttaaagtgcgtgacgatctggcgcaacgcctggcggaatcg
tttgaaaccgcgctcgagctttccggtggtaccgccgtggtcgccgatatggatgacccg
aaagccgaagaaatgctgttctcggccaactttgcctgtccggtgtgcggctacagcatg
cgcgagcttgaaccgcgtatgttctcgttcaacaacccggcgggagcctgtccgacctgt
gacgggctgggtgtgcagcagttcttcgaccctgatcgcgtggtgcaaaaccctgagctt
tcactggcgggtggggctatccgcggctgggatcgtcgtaacttctattatttccagatg
ctgcgctctcttggtgagcattatgatttcgacgtggaagcgccgtttaacgaactgagc
agcgacgtgcaaaacgccatcctgcacggttccggcaaaaccaccattgaattcaaatac
attaacgatcgcggtgatacttcgattcgtcgccatccgtttgaaggcgtactgcacaat
atggagcgccgttataaagaaacggaatccagcgcagtacgtgaagaactgtcgaaatac
atcagcaaccgtccgtgtacttcctgcagcggcacccgcctgcgtgaagaagcccgtaac
gtatttgtcgaagaaaccacgctgccggaaatctctgatttcagcatcggccatgcgatg
gatttcttccgcaatatgaaactcagcggtcagcgcgccaaaattgctgagaaagtgctg
aaagagattggcgatcgcctgaaattcctggtgaacgtcggcctgaattacctctcgctg
tcacgttctgcggaaacgctgtccggcggcgaagcccagcgtatccgtctggcgagccag
attggtgccggtctggtgggcgtgatgtacgtgctggatgagccgtctatcggcctgcat
cagcgcgacaacgagcgtctgctggaaaccctgatccacctgcgcgacctcggtaacacg
gtgattgtggtcgagcacgacgaagacgcgatccgcgctgccgaccatattattgatatt
ggtccgggtgcaggcgtacacggtggcgaagtggtggctgaaggcaccgctgaagacatt
atggcgaccgagaattcactgaccggccagttcctgagcggtaaacgggaaatctccgta
ccggcgcagcgcgtcccggcggatgccaccaaagtgctgaaactttccggcgctaaaggc
aacaacctgaaagatgtcacgctgacgctgccggtgggcctgtttacctgtatcaccggc
gtgtccggctccggtaaatcgacgttgatcaacgacacgctgttcccgctggcacagcgc
gagctgaatggcgcaacgattgctgaagctgcgccgtaccgtgaaatcgaaggtctgggc
catttcgataaagtcatcgacatcgaccagagcccgattggccgtacgccgcgctctaac
ccggcaacctacaccggtattttcacgccggtgcgtgagctgtttgccggtgtgccggaa
tcacgttcacgcggctacacgccggggcgtttcagtttcaacgtcaaaggcggccgctgc
gaagcctgtcagggcgacggcgtgatcaaagttgaaatgcacttcctgccggatatttat
gtgccgtgcgatcagtgcaaaggcaaacgctataaccgcgaaacgctggaaattaaatac
aaaggcaagagcatccacgaagtgctggagatgaccattgaagaagcgcgtgatttcttc
gatgccgtccctgcgctggcgcgtaaattgcagacgctgatcgacgtcggtctgacctac
atcagcctcggccagtcagcgaccacgctgtccggcggtgaagcacagcgcgtcaaactg
gcgcgtgagctgtccaaacgcggcaccggtcagacgttgtatattctcgacgaaccgacc
accggcctgcactttgccgatattcagcaactgctggaagtgctgcatcagctacgcgat
cagggcaacaccatcgtggtgattgaacacaatctggacgtgattaaaaccgcggactgg
attgttgatctcgggccagaaggcggtgcgggcggcggacagattctggtcgccggtacg
ccggaaaccgtcgcggaatgcaaagaatcgcatactgcgcgcttcctgaaaccgttgctg
gaacgccacagccagcaggcgaagaaaagcgcttaa

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