KEGG   Rahnella aceris Y9602: Rahaq_4133
Entry
Rahaq_4133        CDS       T01422                                 
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
rah  Rahnella aceris Y9602
Pathway
rah03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rah00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Rahaq_4133
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rah03021]
    Rahaq_4133
   03400 DNA repair and recombination proteins [BR:rah03400]
    Rahaq_4133
Enzymes [BR:rah01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Rahaq_4133
Transcription machinery [BR:rah03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Rahaq_4133
DNA repair and recombination proteins [BR:rah03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Rahaq_4133
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2
Other DBs
NCBI-ProteinID: ADW75721
UniProt: A0A0H3FEJ9
LinkDB
Position
complement(4507840..4511868)
AA seq 1342 aa
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIK
SYSGNSELQYVSYRLGEPVFDVKECQIRGVTFSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFDKVTYQIRDNKLQME
LVPERLRGETASFDIEADGKVYVEKGRRITARHIRQLEKDEIQRIEVPVEYIAGKVVSKD
YIDTNTGELIVPANMELSLDLLAKLSQSGHKTIETLFTNDLDHGAYMSETIRVDPTSDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKDDIIQVMKKLIGIRNGQGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRRVRDGLVT
DEINYLSAIEEGNFVIAQANSNLDEEGRFIEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGIVQYVDASRIVIRVNEEEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVNLGEPIERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
TEELQILEAGLFARIQSALVAGGVEADKLGKLPRDRWLELSLTDEDKQNQLEQLAEQYDE
LKSEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGEKINAMLKKQEEVSK
LREFIQRAYDLGDDVRQKVDLTTFTDDEVLRLAENLKKGMPIATPVFDGAKETEIKQLLE
MGGIPTSGQITLFDGRTGEQFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq 4029 nt   +upstreamnt  +downstreamnt
atggtttactcctataccgagaaaaaacgcattcgtaaggattttggtaaacgtccacaa
gttttggacattccatatctcctttctatccagcttgactcgttccagaagtttatcgag
caagatccggaaggccagtacggtctggaagctgcattccgttctgtattccctatcaag
agctacagcggtaactctgagctgcaatacgttagctaccgtcttggtgagcctgtattc
gacgttaaagaatgccagatccgtggtgtgacgttctccgcgccactgcgcgtaaaactg
cgcctggtaatctacgaacgtgaagcaccagaaggtacggtcaaagacatcaaggaacaa
gaagtctatatgggcgaaattccgctcatgaccgaaaatggtacctttgtgattaacggt
actgagagggttatcgtatctcagctgcaccgtagtccgggcgtattcttcgacagcgat
aagggtaaaacccactcttcgggtaaagtgctttataacgcgcgtatcatcccttaccgc
ggttcatggttagatttcgagtttgatccgaaagacaacctgtttgtacgtattgaccgt
cgccgtaaattgcctgcgaccatcattctgcgtgcattaaattacacgactgaacagatc
cttgacctgttctttgacaaggtgacttaccagatccgcgacaacaagttgcagatggaa
ctggtacctgagcgcctgcgtggtgaaacagcttcctttgatatcgaagctgacggcaaa
gtctatgtagaaaaaggccgtcgcatcactgcccgtcatattcgtcagcttgaaaaagac
gaaattcagcgcatcgaagttcctgttgaatacatcgcagggaaagtggtctctaaagac
tacatcgacaccaataccggtgagctgatcgtcccggctaacatggaattgtctctggac
ctgcttgctaaactgagccagtccggtcacaaaaccattgaaacgctgttcaccaacgac
ctcgatcatggcgcgtacatgtccgagaccattcgcgtcgacccaaccagcgatcgcctg
agcgcactggttgagatctaccgaatgatgcgtcctggtgagccaccaacgcgtgaagcg
gcggaaagcctgtttgagaacctgttcttctctgaagatcgttacgacctgtctgctgta
ggtcgtatgaagttcaaccgttctctgttgcgtgatgaaatcgaaggttcaggtatcctg
agcaaagacgacatcattcaggtaatgaaaaagctgatcggcattcgtaacggccagggc
gaagtggatgatatcgaccacttgggcaaccgtcgtattcgttccgtcggcgaaatggct
gaaaaccaattccgtgttggtctggttcgtgttgagcgtgctgttaaagagcgtctgtct
ctgggcgacctcgacacactgatgcctcaggatatgatcaacgctaagccgatttcggct
gcggtgaaagaattcttcggctcaagccagctgtcacaatttatggaccagaacaacccg
ttgtccgagatcacgcacaagcgtcgtatctctgcattgggcccgggcggtttgacccgc
gaacgtgctggctttgaagttcgagacgtacacccgactcactacggtcgcgtatgtcca
atcgaaacgccagaaggtccaaacatcggtctgatcaactccttgtctgtctatgcacag
accaatgagtacggtttcctggaaaccccttaccgtcgcgtgcgtgatggtctggtgact
gatgaaatcaactatctgtctgccattgaagaaggcaacttcgtaatcgctcaggcgaac
tccaacctggacgaagaagggcgcttcattgaagacctggtcacttgtcgtagcaaaggc
gaatcaagcctcttcagccgcgatcaggttgactacatggacgtttccacccaacaggtt
gtatccgttggtgcttcattgattccattcctggaacacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggcagttccgactctgcgcgctgataagccgctggta
ggtactggtatggaacgtgctgtagcggttgactccggtgtgactgccgtagccaaacgt
ggcggtattgttcagtacgtggatgcatcccgtatcgttattcgtgttaacgaagaagag
atgtacccgggcgaagcaggtatcgacatttataacctgaccaaatacacccgttctaac
cagaacacctgcatcaaccagatgccgtgtgtgaatctgggcgagccaatcgagcgcggc
gacgtgctggcagatggtccgtctacagatcttggcgaactggctctgggtcagaacatg
cgtgtcgcgttcatgccttggaacggttacaacttcgaagactccatcttggtctccgaa
cgtgttgtgcaggaagaccgcttcacgaccatccatatccaggaactggcatgtgtgtcc
cgtgacaccaagttagggcctgaagagatcaccgctgacatccctaacgtgggtgaagct
gcgctctccaaactggatgaatccggtatcgtttatatcggtgctgaagtgaccggtggt
gacattctggtgggtaaggtaacgcctaaaggcgaaacccagctgacgccggaagagaaa
ctgctgcgtgcgatcttcggtgagaaagcgtctgacgttaaagactcttctctgcgtgta
ccaaacggcgtgtccggtacggttatcgacgtgcaagtcttcacccgcgatggcgtggaa
aaagacaagcgtgcgttggaaatcgaagagatgcagctgaagcaggcgaagaaagacctg
actgaagaactgcagatcctggaagccggtctgtttgcacgtatccagtctgcgctggtt
gctggcggtgttgaagctgacaagctgggcaaattgcctcgcgatcgttggttagaactg
tcactgactgacgaagacaaacagaatcagttggaacagcttgctgaacagtacgacgaa
ctgaaatccgagtttgagaaaaaactcgaagctaagcgtcgtaaaatcactcagggcgat
gatctggcaccaggtgtgctgaaaatcgttaaagtgtatttggccgttaaacgtcaaatc
cagcctggtgacaaaatggcaggccgccacggtaacaaaggtgttatctccaagatcaac
ccgatcgaagatatgccttacgatgaaaacgggactcctgttgatatcgtactgaacccg
ctgggcgttccatcacgtatgaacattggtcagattttggaaacccacctgggtatggcc
gcgaaaggtattggtgaaaaaatcaatgccatgctgaagaaacaggaagaagtttctaag
ctgcgcgagttcatccagcgtgcctatgatctgggcgacgacgtacgtcagaaagtggat
ctgaccacctttaccgatgacgaagtattgcgtctggctgagaacctgaaaaaaggtatg
ccaatcgcgacaccagtcttcgacggtgcgaaagagacagagatcaagcaactgcttgaa
atgggcggaatcccaacctctggtcagatcacactgtttgacggccgtaccggcgagcaa
ttcgagcgtcaggttaccgtcggctacatgtacatgctgaaactgaaccaccttgttgac
gataagatgcacgcgcgttctaccggttcttacagccttgttactcagcagccgctgggt
ggtaaagctcagttcggtggtcagcgcttcggtgagatggaagtgtgggcactggaagca
tatggtgccgcatataccctgcaggaaatgctgactgttaagtccgatgacgtgaatggc
cgtactaagatgtataaaaacatcgtagatggcgatcatcgtatggaaccaggcatgccg
gaatccttcaacgtactgttgaaagaaatccgttctctgggtatcaacatcgagctggaa
gacgagtaa

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