Robiginitalea biformata: RB2501_13709
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Entry
RB2501_13709 CDS
T00992
Name
(GenBank) deoxyribodipyrimidine photolyase-class I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rbi
Robiginitalea biformata
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbi03400
]
RB2501_13709
Enzymes [BR:
rbi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RB2501_13709
DNA repair and recombination proteins [BR:
rbi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RB2501_13709
Prokaryotic type
RB2501_13709
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
EAR15388
UniProt:
A4CKI9
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All DBs
Position
complement(2290832..2292136)
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AA seq
434 aa
AA seq
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MGKSVNIFWFRRDLRLEDNRGLCEALGAGRPVLPIFIFDSEILDGLPADDPRVTFLHDRL
QELRSRMQENQGSSLAIYHGKPLEIFKELASDWDVGQVFTNRDYEPYARDRDEQVGQWLS
EQGIEFHTFKDQVIFEKDEVVKDDGDPYVVYTPYMKKWKQVFRDTPLATFDSAGQLGNLI
AHSRLPNPDLADFGFERSAIPVPDYDMGGKLIDAYEDNRNYPAREGTSRLGPHLRFGTIS
IRQALGKALESSNETFWNELIWREFFMQILWHFPRTVHEAFRKEYDRIAWRNDESEFEKW
REGRTGFALVDAGMRQLNASGYMHNRVRMLTASFLCKHLLIDWRWGEAYFAEKLLDYEMA
SNVGNWQWAAGSGVDAAPYFRIFNPMTQVDKFDKDKSYIREWIPEYGTEDYPEKMVDHKA
ARERCLKTYKAALD
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatccgtcaacatcttctggtttcggcgcgacctgcggctcgaagacaaccgg
ggcctgtgcgaagcgctgggcgcgggcaggcccgtcctccccatttttattttcgattcg
gaaatcctggacgggctgccggcggatgacccccgggttacgttcctccacgaccgtttg
caggagctccgttcccgcatgcaggaaaatcagggcagttccctggcaatctaccacggg
aagcccctggagatttttaaggaactggcatcggactgggacgtcgggcaggtgttcaca
aaccgggattacgaaccctatgcccgggatcgggatgagcaggtgggccaatggctcagc
gagcagggaattgaattccacacattcaaagatcaggtcatttttgaaaaggacgaagtg
gtcaaggatgacggcgacccctatgtggtttacaccccctatatgaagaaatggaagcag
gtcttccgggacaccccccttgcgacgttcgattccgctggccaactggggaacctgatc
gcacattcccggttgcccaacccggaccttgccgatttcggctttgaacgctccgcgatt
cccgttccggattatgatatgggcgggaaactgattgacgcatacgaagacaaccggaat
tacccggcccgggaaggtacctcccggttgggaccccacctgcgctttggcaccatctcc
atccgacaggcgctggggaaggccctggaatcgtccaatgagacattctggaacgagttg
atctggcgggagttctttatgcagatcctctggcatttcccgcgtacggtccatgaggcc
ttccgcaaggaatacgaccgcatcgcgtggcggaacgacgaatcggaattcgagaaatgg
cgggagggccgcaccggctttgccctggtggatgcgggcatgcggcaactcaatgcatcc
gggtatatgcacaaccgcgtacggatgctcacggcgagtttcctctgcaagcacctgctg
atcgactggcgttggggggaggcgtattttgcggaaaaactactcgactacgaaatggcc
agcaatgttggcaactggcagtgggcagccgggagcggcgtagatgcggccccctacttc
cggatctttaacccgatgacccaggtagataaattcgacaaggataaatcctatatccgg
gagtggataccggaatacggcacggaggattaccccgaaaagatggtagatcacaaagcg
gcccgggaacgttgcctgaagacctataaggccgccctggattag
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