Roseiflexus castenholzii: Rcas_0320
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Entry
Rcas_0320 CDS
T00585
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rca
Roseiflexus castenholzii
Pathway
rca02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rcas_0320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rca02000
]
Rcas_0320
Transporters [BR:
rca02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Rcas_0320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABU56453
UniProt:
A7NG66
LinkDB
All DBs
Position
392797..394467
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AA seq
556 aa
AA seq
DB search
MARRIRWQILIAAISSLTVLLLMSYLALTRASVARPLTGGDYVEGVVGAPLHLNPLLVDP
AADPVAADLHRLIFEGLTRPGPDGLPMPALAESWTVDDSGTVYTFTLRSGVAWHDGAPVT
VDDVLFTMRAVQGPAFAGDQNVAAFWRTVLVDRAGERSVSFRLDSPFAPFLRLTGFPILP
AHLLRDTPPEQWEAMAFNRLPVGAGPYRLIERDDQHALLRANSSYFGSPPFIETIELRFF
RTEQDALAALTRGDIQGLAFLSTGALADVNLPRNVVRRQALLDACTVLTFNLRDGPLTEI
GVRRALAMALDKDALIAGVLNGQVARLDTPILHGWWAEAPDVQWYEPDPARAVSALDALG
YVAGADGIRARNGQRLAFTLLTDSSPKRRAVAEEIARQWSAIGVRIVIEQVESGDLQRRL
ETHDFTMALHGWQRLGSDPDVFELWHSSQAERGRNYTGLTDADIDELLYNARKIYDIADR
AALYNEFQQRWVDLAPGIMLYQPFLIHATVADLGSIIAVAPDEAVSPRLIMGREGRFADV
NRWYLRSDREIRGDLR
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccgcattcgctggcagattctgatagctgcgatcagttccctgaccgtgctc
ctcctcatgagttacctggcgctgacgcgcgcatcggtcgcccgtccgctgacaggcggt
gattatgtcgaaggggtcgtcggcgcaccgctgcatctcaatccactgctggtcgatcct
gccgccgatccggttgctgccgatctacaccgcctgatctttgagggattgacacgcccc
ggtcctgatggattgcccatgccggcgcttgccgagtcctggacggtcgatgacagtggg
acggtctacacctttacgctgcgcagcggcgtcgcctggcacgatggcgcgccggtgacg
gtcgatgatgtgctgttcacgatgcgcgccgtgcagggtcctgcgtttgccggtgatcag
aatgtcgccgctttctggcgcacggttctggttgatcgcgccggagagcgcagcgtcagt
ttccgccttgactctccatttgcgcctttcttaaggttgactggttttccgatcctgccg
gcgcacctgttgcgtgatacgccgccggaacagtgggaggcgatggcattcaaccgcttg
ccggttggcgccggtccgtatcgattgatcgaacgagatgatcaacatgctcttttgcgc
gccaactcgtcctactttggttcgccgccgttcattgaaacgattgaactgcggttcttc
cgcaccgaacaggatgcgctcgcagccctgacgcgcggtgacattcagggtcttgctttc
ctgagcaccggcgccctggcggatgtgaacctgccgcgcaatgtggtgcgccgacaggca
ttgctggatgcctgcaccgtcctgaccttcaatctacgcgatggtccgctcactgagatt
ggcgtgcgccgcgcattggcgatggcgctcgataaggatgcgttgatcgccggagtgctg
aacggtcaggtcgcacggcttgatacgccgatcctgcacggatggtgggctgaagcgcct
gatgtgcagtggtacgaacccgatcccgcacgagccgtatccgcactcgatgcgctggga
tacgtcgccggcgccgatggcattcgcgcacgcaacggtcaacgacttgcctttaccctc
ctgaccgacagttctcccaaacggcgcgcggtagcagaagagatcgcccgccagtggagc
gccatcggcgtgcgcattgtgatcgagcaggttgagtccggcgatctccagcgccgtttg
gaaacccacgactttactatggcgctgcacggctggcaacggctcggttccgatcccgac
gtctttgaactctggcattcgagccaggcggaacgcggacggaactacacaggtctgacc
gatgctgacattgatgaactgctctacaacgcgcgtaaaatctacgacatcgctgaccgc
gccgcgctctacaacgaatttcagcaacgctgggtcgatctggcgccggggattatgctg
tatcaaccgttcctgattcatgccaccgttgccgaccttggcagcatcatcgctgttgcg
cctgatgaagccgtttcgccgcgcctgatcatggggcgcgaggggcgcttcgccgacgtc
aaccgttggtatctgcgcagcgatcgcgaaatccgcggcgatttgcggtga
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