Rhodospirillum centenum: RC1_1224
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Entry
RC1_1224 CDS
T00785
Name
(GenBank) metallo-beta-lactamase, putative
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
rce
Rhodospirillum centenum
Pathway
rce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RC1_1224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rce03019
]
RC1_1224
Messenger RNA biogenesis [BR:
rce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RC1_1224
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RMMBL
Lactamase_B_2
Lactamase_B
RNase_J_C
TSKS
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
ACI98636
UniProt:
B6ISW5
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All DBs
Position
complement(1277327..1279009)
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AA seq
560 aa
AA seq
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MDNAIALGDADFDPGALYFVPLGGSGEIGMNLNLYGHAGRWLMVDLGISFGDETTPGVEI
LLPDPAFIAERREDLAGLVITHAHEDHLGAVPYLWPELRCPVYCTPFAASVLRVKLQERG
LSGDVQIIEVPLSGRFQVGPFDLELVTVTHSIPEPNALVIRTPAGTVLHSGDWKLDPDPV
IGTTADEAALKRLGREGVTALVCDSTNALVPGVAGAEAAVRDSLITLFGRYTGRIAVGCF
ATNVARLHSIAVAAQANDRHVALVGRSLWRIDAAARANGYLTDLPPFVTEHDAGFLPRDK
CVLICTGSQGEPRAALSRIAGGDHPEIDLVPGDVVVFSAREIPGNEKDIAKVQNALIRRG
IEVVTADDAFVHVSGHPARDELTSLYQWVRPRAVIPVHGERRHLTANAQLAQQCQVGETV
IPEDGAVIRIGPGPAEIVGHVPSGRLCLDGRRIVPVHGGAMRSRHRMMNNGAAVATVLLT
AKGDLATDPRVSVMGLLDPEETEAAVADLVDLLRRTVETMPMPSRRDDEAVREAVRLAIR
RSFNASQGRKPLTEVHVVRL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggataatgcgattgccctcggcgacgccgatttcgatcccggggccctgtacttcgtg
ccgctgggcgggtccggcgagatcgggatgaacctcaatctctacggccacgccggccgg
tggctgatggtcgatctcgggatcagcttcggcgacgagacgacgcccggcgtggagatc
ctgctgccggacccggccttcatcgcggagcgcagggaggatctggccggcctcgtcatc
acccacgcgcatgaggaccatctcggcgccgtgccctatctctggccggaactgcgctgt
ccggtctactgcacccccttcgcggcttccgtgctgcgggtgaagctccaggagcgcggc
ctctccggcgacgtgcagatcatcgaggtgccgctgtccggccgcttccaggtcggcccc
ttcgacctggagctggtgaccgtcacccactccatcccggagccgaacgccctggtcatc
cgcaccccggcgggcaccgtgctgcacagcggcgactggaagctggaccccgatccggtg
atcggcaccaccgccgacgaggcggcgctgaagcggctggggcgggaaggggtgaccgcc
ctcgtctgcgacagcaccaacgcgctcgtgcccggcgtcgcgggggcggaggcggccgtg
cgcgacagcctcatcaccctgttcgggcgctacaccgggcgcatcgcggtcggctgcttc
gccaccaacgtggcccggctgcactccatcgccgtcgccgcgcaggccaacgaccgccat
gtcgctctggtcgggcggtcgctctggcggatcgacgcggcggcgcgggcgaacggctac
ctgaccgacctgccgcccttcgtcaccgagcatgatgcgggcttcctgccgcgcgacaag
tgcgtgctgatctgcacgggcagccagggcgagccccgggcggcgctgtcccgcatcgcg
gggggcgaccatccggagatcgacctcgtgccgggcgatgtcgtcgtcttctccgcccgc
gagattccgggcaacgagaaggacatcgccaaggtccagaacgccctgatccgccgcggc
atcgaggtggtgacggcggacgacgccttcgtccatgtctcgggccatccggcgcgggac
gagctgaccagcctctaccagtgggtcaggccgcgggccgtgatccccgtccatggcgag
cgccggcacctgacggcgaacgcccagctcgcgcagcagtgccaggtgggcgagacggtg
atccccgaggacggcgccgtcatccgcatcggacccggcccggcggagatcgtgggccat
gtgccgtccgggcggctctgcctggacgggcggcggatcgttccggtccatggcggcgcc
atgcgctcgcgccaccgcatgatgaacaacggtgccgccgtcgccacggtgctgctgacg
gccaagggcgacctcgccaccgatccccgggtctccgtcatggggctgctggacccggaa
gagacggaagcggcggtcgccgatctggtggacttgctccgccggaccgtcgagactatg
cccatgccgtcgcggcgggacgacgaggcggtgcgcgaagccgtgcgccttgccatccgg
cgcagcttcaacgccagccaggggcgcaagcccctgacggaagtacatgtcgtccgcctc
tga
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