Ruminococcus champanellensis: RUM_13850
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Entry
RUM_13850 CDS
T02600
Name
(GenBank) SNF2 family N-terminal domain.
Organism
rch
Ruminococcus champanellensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
FliJ
CCDC93_CC
EzrA
Motif
Other DBs
NCBI-ProteinID:
CBL17498
UniProt:
D4LD03
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Position
1528198..1530570
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AA seq
790 aa
AA seq
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MVSAAMESKRLGLRSKSLFVVPNHLTEQWASEFLQLYPSANILVATKKDFETKNRKKFCG
RIATGDYDAIIIGHSQFEKIPMSIERQRAILEQQLDEVTEGIAELKKNRGDNFSVKQLER
TKKSVKQKLDKLNDQSKKDDTVTFEELGVDRLFIDESHYYKNLFLFTKMRNVGGIAQTEA
MKSSDLFMKCRYLDELTGGRGTVFATGTPISNSMVELYTIQRYLQYNTLVQNNLQHFDAW
ASTFGETITAVELTPEGTGYRAKTRFARFYNLPELMAMFKEIADIKTADMLDLPVPKAVF
HNISVKPSEIQKQMVAELAERAERVRNGMVDAKEDNMLKITNDGRKLALDQRLINPLLPD
FEDSKLNACVDAMFETWERGSEKRLTQLFFCDLSTPKNDGSFNVYDDIRQKLIARGVPAD
EIKFIHEADTEAKKLELFKKVRRGDVRILMGSTQKMGAGTNVQNKLAASSDLDCPWRPSD
LEQRLGRSIRQGNENAEVHIYRFVTEETFDAYLYQLVEGKQKFASQIMTSKSPVRSCEDI
DETALSYAEIKMLATGNPHIKEKMDLDIQVQKLRLLKSSFLSEKYALEDKIIKFYPQEIA
RRADVIAGLKSDIERVAEHPKPSDETFIGMTVKGAFYSEKADAGNAILEACKAMTNPDPI
PLGEYRGFTMELYFEAREYKVRLKGELGYPVTLGTDTFGNITRLDNALEGLPKRLEMNEM
ELDNLKKQFETAKVDVERPFPQEEELKAKTDRLNELNALLNVDKRENEIVGGEPDEGEEP
PEKKPRDLER
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggtttcggcggcgatggagtccaaacggctcggattgcgcagtaaatccctgtttgtc
gtacccaaccacctcactgagcagtgggcatcggagtttttacagctctatccctcagcc
aacattttggtggcaacgaagaaagactttgaaaccaagaaccgcaaaaagttctgcggc
agaattgccaccggcgattacgatgccatcattatcgggcattcgcagttcgagaaaata
ccgatgtccattgaacggcagcgggcgatcctcgaacagcagcttgatgaggtaacggag
ggcattgcggaattgaaaaagaaccgtggagataacttctccgtaaaacaactggagcgc
acaaagaaatctgtcaagcagaagctcgataagctcaacgaccaatccaaaaaggatgat
acagtgacctttgaggagttgggtgtggacagacttttcattgatgagagccactactat
aagaatctgttcctctttactaagatgcggaatgtaggcggcatcgcccaaaccgaagcg
atgaaatccagcgacctctttatgaaatgcaggtacttggacgagttgaccggagggcgt
gggacagtgtttgcgacaggaacgccgatctccaattcaatggtcgagctttacaccatt
cagcggtacttgcagtacaacacccttgttcagaacaacttgcagcacttcgatgcctgg
gcttccactttcggagaaaccattacggcagtagaactaacacccgaaggaacgggatac
cgagccaaaacacgctttgcccgcttctacaatttaccggagctgatggcgatgtttaag
gaaatcgcagacatcaaaacagcggatatgcttgacctgccagtgccgaaagcggtcttt
cacaatatctcggtgaagccctctgaaatccaaaagcagatggtagccgagcttgcggag
agagccgaaagggtacgaaacggtatggttgatgccaaggaagataatatgctcaagatc
accaacgacggcagaaagctggctcttgatcagcggcttatcaatccgttgctccctgat
tttgaggacagcaagctcaacgcctgcgtggacgctatgtttgaaacttgggagcgtggc
agtgaaaagcggctgacccagctattcttctgcgacctttctacgccgaaaaacgacggc
tctttcaatgtttatgatgacatccggcagaagctgattgcccgtggcgtacccgccgat
gagataaagttcatccacgaagcggataccgaagcaaagaagctggagctgttcaagaag
gtgcgccgaggggatgtccgcatcctgatgggcagtacgcagaagatgggagccggtacg
aatgtgcagaacaaacttgccgcatcctccgatctcgattgcccgtggcgaccctctgac
ttggaacagcggctcggtagaagtatccggcaaggcaacgaaaatgcagaggttcacatc
taccgtttcgtaacggaggaaacctttgatgcctatttgtatcagctcgtggagggcaag
cagaagttcgcttcgcagataatgaccagtaaatcgccggtgcgatcctgcgaggatatt
gacgaaaccgcactgtcctatgctgagatcaagatgctggcgaccggcaatccccacatc
aaagagaagatggacttggacattcaggtgcagaaattgcggctcttaaagtccagtttc
ctttccgaaaaatatgctttggaggataagatcatcaagttctatccgcaggagatcgca
cggcgggctgatgtaattgcgggcttaaaatccgatattgaaagagtggcagagcacccg
aagccgtctgatgaaacctttattggtatgacggtcaagggtgctttctattcagagaaa
gcggatgccggcaacgctatcttggaggcgtgtaaggcaatgacaaatcccgaccccatt
cccctcggtgagtaccgtggctttacgatggagctgtactttgaagcaagagaatacaaa
gtgcggctcaagggtgagcttggctatcccgtaaccctcggcacggacaccttcggtaat
atcacccgcttggataatgcgctggaggggcttccaaagcgtttggagatgaacgaaatg
gagcttgataacctcaaaaagcagtttgaaactgcgaaggtcgatgtggaaagaccgttc
ccgcaggaggaagaattgaaagccaagaccgaccggctgaatgaactcaacgccctgctc
aatgtggataagcgtgagaacgagatcgttggcggtgaacccgatgagggtgaagaaccg
cccgaaaagaaaccgagggacttggaaagatag
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