Ruminococcus champanellensis: RUM_23150
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Entry
RUM_23150 CDS
T02600
Name
(GenBank) methionyl-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch00450
Selenocompound metabolism
rch00970
Aminoacyl-tRNA biosynthesis
rch01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RUM_23150
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RUM_23150
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rch01007
]
RUM_23150
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rch03016
]
RUM_23150
Enzymes [BR:
rch01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
RUM_23150
Amino acid related enzymes [BR:
rch01007
]
Aminoacyl-tRNA synthetase
Class I (U)
RUM_23150
Transfer RNA biogenesis [BR:
rch03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RUM_23150
Prokaryotic type
Other AARSs
RUM_23150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA_bind
tRNA-synt_1e
Anticodon_3
Anticodon_1
tRNA-synt_1f
DUF1272
Phage_T7_55
Motif
Other DBs
NCBI-ProteinID:
CBL18307
UniProt:
D4LFB2
LinkDB
All DBs
Position
complement(2466362..2468305)
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AA seq
647 aa
AA seq
DB search
MSKKPYYITTAIAYASRKPHIGNTYEVVFTDAVARYKRMQGYDVFFLTGTDEHGVKIEEL
AKSEGITPKEHVDKVVGEIQDICKLMHISYDGFIRTTDPRHEEVVQKIFKKLYDQGDIYK
SEYEGMYCTPCESFWTPSQLVDGKCPDCGREVQPAKEEAYFLRLSKYQQWLEEYIETHPD
FIVPEGKKKEMMNNFIKPGLQDLCVSRTTFQWGIPVTFDPKHVIYVWVDALSNYITAMGY
DPDGSSDQFKKYWPCDCHVIGKDIMRFHSIYWPVMLHALGLELPRQLFGHNWILFGEDKM
SKSRGNVIYASDVVDAFGVDAARYYLLSEMPYGSDGSITYESLIERFNTDLANTLGNLVN
RTIAMAQKYFGGVIQPADAAEPVDADLRATALKTVEEVDRLMNQYRMADTLDAVISLARR
SNKYIDETMPWVLAKDEAQKPRLGAVLYNLLESIRFLAVLLQPFMPETAEKIFAQLNTDC
KDYASLSAFGGLHAGDKVGEPVPLFGRIDAEQMIQQLKAKQEAAAAPAQEPAQEAIQLAP
EISIEDFAKVELRVAKVLSAEKVKKSSKLLCIQLDDGMGGRQVVSGIAKWYKPEELVGKK
VIVVANLKPVKLCGVESNGMICAADLPDGSVRVLFADDSMACGAKIR
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaagccttattacatcaccacggccattgcctatgcgtccagaaagccgcac
attggcaatacctacgaagtggtgttcaccgatgccgtagcgagatataagcgaatgcag
ggctatgatgtattcttcctgaccggtacggacgagcatggcgtcaagatcgaggagctt
gccaagtccgaggggatcaccccgaaggagcatgtggacaaggtagtcggcgagatccag
gacatctgcaagctgatgcatatatcatacgacggattcatccgcacaacggatccccgg
cacgaggaagtggtacagaagatcttcaagaagctgtacgaccagggggatatctacaag
agcgagtatgagggcatgtactgtactccctgcgagagcttctggacgccctcccagttg
gtggacggcaagtgtccggactgtggcagagaggtgcagcccgccaaggaggaggcatac
ttcctgcggctgtccaagtatcagcagtggctggaggagtacattgaaacccatccggac
ttcatcgtccccgagggcaagaagaaggaaatgatgaacaacttcatcaagcccggcctg
caggatctgtgcgtatcccgcaccaccttccagtggggcatcccggtgaccttcgatccc
aagcatgtgatctatgtgtgggtcgacgccctgtccaactatatcaccgccatgggctac
gatccggacggctccagcgaccagttcaaaaagtactggccctgtgactgccatgtgatc
ggcaaggacattatgcggttccattccatttactggcccgttatgctccatgcgctgggt
ctggagctgccccggcagctgtttggtcataactggatcctgttcggagaggacaaaatg
agcaagtccaggggcaacgtgatctacgccagcgatgtggtggacgcattcggggtggat
gctgccagatactacctgctcagcgagatgccctacggctccgacggctccattacctac
gaatccctcatcgagcggttcaatacggatctggcaaacaccctggggaatctggtgaac
cggaccatcgccatggcgcagaagtacttcggcggcgtgatccagccggcggatgccgcc
gagccggtggatgcagatctccgggcaacggcactgaaaaccgtggaggaagtagaccgg
ctcatgaaccagtaccggatggcggataccctggacgctgtcatctccctggcaagacgg
agcaacaagtacattgacgagaccatgccctgggtgctggcaaaggacgaggcacagaag
ccccggctgggtgcggtgctgtataatctgctggaaagcatccgcttcctggcggttctg
ctccagccctttatgccggaaaccgcagagaagatctttgcccagctgaacacggactgc
aaggactatgcaagcctgtcggcgttcggcggtctgcatgcaggggacaaggtgggcgag
ccggtgcccctgttcggcagaatcgatgcggagcagatgatccagcagttgaaggcaaag
caggaggctgccgccgcaccggcacaggagccggcgcaggaagccattcagcttgcaccg
gagatctccatcgaggactttgccaaggtggagctgcgggtggcaaaggtgctttccgca
gagaaggtgaaaaaatcctccaagctgctgtgcatccaactggatgacggcatgggaggc
aggcaggtagtgtccggcattgccaagtggtacaagccggaggagctggtgggcaaaaaa
gtcatcgtggttgccaacctgaagcctgtgaagctgtgcggcgtagagagcaacggcatg
atctgtgcggcagacctgccggacggcagcgtcagggtgctgtttgcggatgattccatg
gcctgcggcgccaagatccgatga
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