Rhodobacter capsulatus: RCAP_rcc01558
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Entry
RCAP_rcc01558 CDS
T01213
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RCAP_rcc01558 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcp03400
]
RCAP_rcc01558 (uvrA)
DNA repair and recombination proteins [BR:
rcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RCAP_rcc01558 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RCAP_rcc01558 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
BCA_ABC_TP_C
AAA_29
AAA_16
AAA_25
RsgA_GTPase
DnaJ_CXXCXGXG
DUF4350
AAA_21
nSTAND1
ATPase
Motif
Other DBs
NCBI-ProteinID:
ADE85303
UniProt:
D5ATL4
LinkDB
All DBs
Position
1688414..1691287
Genome browser
AA seq
957 aa
AA seq
DB search
MAEQKFIEVRGAREHNLKGVDLDIPRDALTVITGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLDQMGKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLFARAGT
PYSPATGLPIEAMQVQDMVDRVMAMEEGARGYLLAPVIRDRKGEYRKEFAEWRKAGFQRV
KVNGAFYDLEEPPVLDKKFRHNIDVVVDRIVVRPGLETRLADSFRTALDLADGIALWEDA
LSTEETEAGKEAQRITFSEKFACPVSGFTIAEIEPRLFSFNAPFGACPVCDGLGVELFFD
DRLVVPDTSLTLAAGALAPWAKSKSPYFIQTIDALSKHYGFDKKKPWKSLPPEVQRLFLY
GSGKDEIKFRFDEGGRVYEVTRSFEGVIPNMERRYRETDSAWVREEFERYQNNRPCGACG
GYRLKPEALAVKIAGLHIGQIVEMSIKEAFAKIEDIPVQLSKQKNEIARPILKEIRERLG
FLINVGLDYLTLSRAAGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLL
STLKNLRDQGNTVLVVEHDEDAIRHADYVFDIGPGAGVHGGQVVAQGTPAEIAADPASLT
GQYLAGTRRIEVPVQRREGNGKKLVISKACGNNLKDVTAAFPLGKFVCVTGVSGGGKSTL
TIETLYKTAAMRLNGARETPAPCDSIKGFEHLDKVIDIDQRPIGRTPRSNPATYTGAFTP
IRDWFAGLPEAQARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCETCKGHR
YNRETLEIKFKDKSIADVLEMTVEDAQEFFKAVPSIREKMDALVEVGLGYIKVGQQATTL
SGGEAQRVKLSKELARRATGRTLYILDEPTTGLHFEDVRKLLEVLHSLVDQGNTVVVIEH
NLDVIKTADWIIDIGPEGGDGGGRIVAEGTPEQVAAHPASHTGRYLAPMLGMKVAAE
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcaaaagttcatcgaagtgcgcggggcgcgcgagcataacctcaagggcgtc
gatctcgacattccgcgcgatgcgctgacggtgatcaccgggctttccggctcgggcaag
tcctcgctcgcctttgacacgatctatgccgaggggcagcgccgctatgtcgaaagcctc
tcggcctatgcgcggcagtttctggaccagatgggcaagcccgatgtcgatcacatctcg
gggctgagccccgcgatttcgatcgagcagaagacgacctcgaagaacccgcgctcgacc
gtcggcacggtgaccgagatttacgactatctgcggctgctctttgcccgcgcgggcacg
ccctattcgcccgccaccggcctgccgatcgaggcgatgcaggtgcaggacatggtcgat
cgcgtcatggcgatggaggagggggcgcggggctatctgctggcccccgtcatccgcgac
cgcaagggcgaatatcgcaaggaattcgccgaatggcgcaaggcgggctttcagcgggtg
aaggtgaacggggcgttttacgacctcgaggagccgcccgtgctggacaagaaattccgt
cacaacatcgatgtggtggtggatcggatcgtcgtgcggccggggctggagacgcggctg
gcggacagtttccgcaccgcgctcgatctggccgacggcatcgcgctgtgggaagacgct
ctgtcaaccgaggagaccgaggcgggcaaggaagcgcagcgcatcacgttctcggagaaa
ttcgcctgtccggtcagtggcttcaccattgcggaaatcgagccgcggctgttttccttc
aacgcgccctttggcgcctgcccggtttgcgacgggctgggggtggagctgttcttcgat
gaccggctggtggtgcccgacacatccctgacgctggccgccggggcgctggccccctgg
gcgaagtcgaaaagcccctatttcatccagaccatcgacgcgctttcgaaacattacggc
tttgacaagaagaagccgtggaaatcgctgccgcccgaggtgcagcggctgttcctttat
ggctccggcaaggacgagatcaagttccgctttgacgagggcggccgggtctatgaggtg
acgcgcagtttcgaaggcgtgatcccgaacatggagcgacgctatcgcgagaccgacagc
gcctgggtgcgcgaggaattcgagcgctatcagaacaaccgcccctgcggcgcctgcggc
ggctaccggctgaaacccgaggcgctggcggtgaagatcgccgggctgcacatcggccag
atcgtcgaaatgtcgatcaaggaggccttcgcgaagatcgaggacatccccgtccagctg
agcaagcaaaagaacgagatcgcccgcccgatcctcaaggaaatccgcgagcggctgggc
tttctgatcaatgtcgggctggattatctgaccctgagccgggcggcggggacgctttcg
ggcggcgaaagccagcgcatccggctggcgagccagatcggctccggcctgaccggggtg
ctttacgtgctcgacgaaccgagcatcgggctgcatcagcgcgacaatgaccggctgctt
tcgacgctgaaaaacctgcgcgatcaaggcaatacggtgctggtggtcgaacatgacgaa
gatgcgatccgccatgccgattatgtcttcgacatcggcccgggcgcgggggtgcatggc
gggcaggtggtggcgcagggcacgcccgccgagattgccgccgatccggccagcctgacc
gggcaatatctggcgggcacgcggcgcatcgaagtgcccgtgcaacggcgcgaggggaat
ggcaagaagcttgtgatttcaaaggcctgcggcaacaacctgaaagatgtgacggctgcg
tttccgctgggcaaattcgtctgcgtgaccggcgtctcgggcggcggcaaatccacgctg
accatcgagacgctttacaagaccgcggcgatgcggctgaacggcgcgcgggaaacgcct
gcgccttgcgacagcatcaagggcttcgagcatctcgacaaggtgatcgacatcgaccag
cggccgatcgggcgcacgccgcgctcgaaccccgcgacctataccggcgcctttaccccc
atccgcgactggttcgcgggcctgcccgaggcgcaggcgcgcggctacaagcccgggcgg
ttcagcttcaacgtcaagggcgggcgctgcgaggcctgtcagggcgatggcgtgatcaag
atcgagatgcacttcctgcccgacgtgtacgtcacctgcgagacctgcaagggccaccgc
tacaaccgcgagactttggagatcaagttcaaggacaagagcatcgccgatgtccttgaa
atgacggtggaagatgcgcaggaattcttcaaggccgtgccctcgatccgggaaaagatg
gatgctttggtcgaggtggggctgggctatatcaaggtcgggcagcaggcgacgacgctt
tcgggcggcgaggcgcagcgggtgaagctgtcaaaggaactggcgcgccgcgccaccggg
cggacgctttacatcctcgatgaacccacgacggggctgcatttcgaggatgttcgcaaa
cttctggaagttctgcattctctggtcgatcagggcaacacggtcgtggtgatcgagcac
aatcttgacgtgatcaagaccgccgactggatcatcgacatcggtcccgagggcggcgat
ggcggcgggcggatcgtggccgagggcacgccggaacaggtggcggcccatccggccagc
cataccgggcgctatctggcgccgatgctggggatgaaggtggcggcggaatga
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