Rhodobacter capsulatus: RCAP_rcc02054
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Entry
RCAP_rcc02054 CDS
T01213
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp00860
Porphyrin metabolism
rcp01100
Metabolic pathways
rcp01240
Biosynthesis of cofactors
Module
rcp_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RCAP_rcc02054 (cobD)
Enzymes [BR:
rcp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
RCAP_rcc02054 (cobD)
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Gene cluster
GFIT
Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
ADE85798
UniProt:
D5AV16
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All DBs
Position
complement(2212956..2213900)
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AA seq
314 aa
AA seq
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MNFAAMMVVAIGIDLALGWPDALYKRIGHPVTWIGALIARLEKGWNFKGRLRRLRGVLVA
LAVIGTTVVIALAVQLWLPAGWPGVLIGGILAWPFVALRSMHDHVAAVAKPLIAGDLPGA
RQAVSMIVGRDPSQLDQPGVARAALESLAENSSDGIVAPLFWGCVAGLPGIAGYKAINTL
DSMIGHRTDRYEEFGWASARIDDLVNLIPARLTGLFFALASPCRARALAVMARDARSHRS
PNAGWPEAAMAGALAVRLSGPRIYADRVANEPWLNGTAPDPRPADLARGLALYRRAMAGM
TLVIGLVAVLWSVS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgccgcgatgatggtggtggcgatcgggatcgatctggcgcttggctggccc
gacgcgctttacaagcgcatcggccatccggtgacctggatcggcgcgctgatcgcgcgg
ctggaaaagggctggaatttcaagggccgcctgcgccgtctgcgcggggtgctggtggcg
cttgcggtgatcggcaccacggtggtcatcgcactggcggtccagctctggctgcccgcg
ggctggccgggggtgctgatcggcggcatccttgcctggcccttcgtcgcgctgcgctcg
atgcatgatcacgttgctgccgtggcgaaaccgctgatcgcgggtgatctgcccggcgcg
cgacaggcggtctcgatgatcgtcgggcgcgatccgagccagctggatcaaccgggcgtc
gcccgtgccgcgctggaaagcctggccgagaacagctcggacgggatcgtcgcgcccctg
ttctggggctgcgtcgcggggctgcccggcattgccgggtacaaggcgatcaacacgctt
gattcgatgatcggccaccgcaccgaccgctacgaggaattcggctgggcctcggcgcgg
atcgacgatctggtgaacctgatcccggcgcgtctgaccgggctcttcttcgcgcttgcc
tcgccctgccgggcgcgggcgctggcggtgatggcgcgcgatgcaaggtcgcatcgttcg
cccaatgcgggctggcccgaagccgcgatggcgggcgcgctggcggtccgcctgtccggg
ccgcgcatctatgccgaccgggtcgcaaacgaaccgtggctgaacggcaccgcccccgat
ccgcggcccgcagacctggcccgcgggcttgcgctttaccgccgcgcgatggcagggatg
acgctggtcatcggccttgtggccgttttgtggagtgtttcttga
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