Ricinus communis (castor bean): 8264822
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Entry
8264822 CDS
T01087
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
8264822
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcu04040
]
8264822
Ion channels [BR:
rcu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
8264822
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
PLA2G12
Motif
Other DBs
NCBI-GeneID:
8264822
NCBI-ProteinID:
XP_002529385
UniProt:
B9STR6
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Position
3:23935883..23946594
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AA seq
735 aa
AA seq
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MFDCNYKSQYLGGQREKFVRLDDLDSRLSSSSDTGGKKCGFGIEGFGRAGQGTNTTTTSR
SFKKGIRKGSEGLKSIGRSLRFGVSRAVFPEDLKVSEKKIFDPQDKFLLLCNRLFVISCI
LGVSVDPLFFYLPVFNDPAHCLGIDRKLAIIATTLRTVIDAFYLIRMALQFRTAYIAPSS
RVFGRGELVIDPAQIAKRYLRQYFIIDFLSVLPLPQIVVWRFLQRSNGSDVLATKQALLF
IVLLQYIPRFLRIFPLFSEMKRTTGVFAETAWAGAACYLLMYMLASHIVGAFWYLLAVER
QDTCWQKACHDTEKCNKNFLYCSNQHMSDYASWANISSNVLQSKCEAKDEDGPFDYGIYT
NALSSGIASSMKFISKYCYCLWWGLQNLSTLGQGLQTSTYPGEVIFSISLAIFGLILFAL
LIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLETRGVDEE
SLVQSLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLFTERTYIVREGD
PVDEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGVNLPSSTRT
VKALTEVEAFALIAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSK
RKNMELRRKEEEDEVDETRSNAGGGSYSIGATFLATRFAANALRGVHRNRNAKTARELVK
LQKPPEPDFSAEDAD
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattgtaattacaaatcccaatacctgggtggtcagagggagaagtttgtcagg
ttggacgacttggactctaggttatcatcatcttctgatactggaggaaaaaaatgtgga
tttggcatagaaggatttggtcgtgctggtcagggaaccaatacaacgacaacatccaga
tctttcaagaaaggaatcagaaagggatctgaaggacttaagtctattggtcggtcactt
agatttggggtgtctagggcagtatttccagaagatcttaaagtttctgaaaagaagata
tttgatcctcaagacaaatttctccttttgtgcaacagattgtttgtcatatcatgtatt
ttgggcgtgtctgtggaccctctgtttttttatcttccagtttttaatgatccagcacac
tgtcttggaatagatagaaaattagcaattatagcaactactttgaggactgttattgat
gctttctatcttattcgtatggctcttcagttccggacagcttatatagctccatcttct
cgtgtattcgggcgaggtgaacttgtgatagatccagcacaaatagccaagagatacttg
cgtcagtatttcatcatcgattttctttctgtcctccccctaccacagattgtggtttgg
agatttcttcagaggtcaaatggttcagatgtcctggcaactaaacaggccttgcttttt
attgtcttgcttcaatacattcctaggtttcttcgaatctttcccttattttcagaaatg
aaaagaacaaccggagtctttgctgaaactgcttgggcaggtgctgcttgttatctgcta
atgtacatgcttgctagtcatatagttggtgcattctggtatttgttagctgttgagcgg
caggacacatgctggcaaaaggcttgtcatgatactgagaaatgcaataaaaatttcctg
tattgtagcaatcaacatatgagtgattacgcttcctgggccaacatcagcagtaatgtt
cttcagtcgaaatgtgaagcaaaagatgaagatggaccgtttgattatggaatttatact
aatgccttatcatctgggattgcatcatctatgaagttcatatccaagtactgttattgc
ttgtggtgggggcttcagaatttgagcacacttggccaggggcttcagaccagcacttat
ccaggggaggttatattttctatatcactagctatttttgggcttatcctctttgcactc
ctgattgggaatatgcagacctatcttcagtcgcttactattcgattagaagaaatgaga
gttaaaaggcgcgactcagaacaatggatgcatcataggttgcttccacaagatcttagg
gaacgggtgaggcgctatgaccagtacaaatggttagaaacacgtggggtggatgaagag
agtttggtgcagagcctgccaaaggatcttaggagagacattaaacggcacctctgtttg
gcgttggtgaggagggttcctctatttgagaatatggatgagaggttgctcgatgccatt
tgtgagaggttgaaaccttgcctgtttacagagagaacttacatagttcgagaaggagat
ccagttgatgaaatgctttttatcatacgtggtcgacttgaaagtgtaaccacagatggt
gggaggagtggcttcttcaaccgtagtttgctaaaagaaggagatttctgtggtgaggag
cttttgacctgggcattggatcctaaatccggtgttaatctcccatcttctacccgcaca
gtgaaggctttgacagaagtggaggcctttgccctcatagctgaagagttaaaattcgtg
gcaagccagttcaggcgtcttcacagtaggcaagttcagcacaccttcagattttactcc
cagcagtggaggacgtgggctgcttgctttattcaggctgcatggcgacgctattccaaa
aggaagaatatggagcttcgtaggaaggaagaagaggatgaagtagatgaaactcgcagc
aatgctggtggaggttcatatagcataggtgccacctttttggctaccaggtttgcagcc
aacgctcttcgtggtgttcatcgaaatcggaatgccaagactgctagagaattggtgaaa
ctacagaaaccgcctgaacctgattttagtgctgaagatgctgattga
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