Ricinus communis (castor bean): 8281056
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Entry
8281056 CDS
T01087
Name
(RefSeq) replication factor C subunit 1 isoform X3
KO
K10754
replication factor C subunit 1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03030
DNA replication
rcu03410
Base excision repair
rcu03420
Nucleotide excision repair
rcu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
8281056
03410 Base excision repair
8281056
03420 Nucleotide excision repair
8281056
03430 Mismatch repair
8281056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcu03032
]
8281056
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8281056
DNA replication proteins [BR:
rcu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
8281056
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
8281056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_30
AAA_19
DNA_pol3_delta
Rad17
RuvB_N
nSTAND3
BRCT_2
AAA_assoc_2
AAA_18
Zeta_toxin
Sigma54_activ_2
AAA_14
AAA_24
AAA_5
Gp44_lid
AAA_16
RNA_helicase
TsaE
AAA_17
AAA_28
NTPase_1
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
8281056
NCBI-ProteinID:
XP_002513738
LinkDB
All DBs
Position
8:24567710..24581901
Genome browser
AA seq
977 aa
AA seq
DB search
MQGDIRKWFMKAHDKGNGTAAKSAQPATDIKLPSVESKPEFPVQGGQDNSGRRKTSKYFA
KDKQQSKAEKEIEELPAKRKARNGSDRSTKTPPSKKVHKIEDNEDDDDDDDDDFVMPDKK
KSAGEVTPSKKSKNGSGRGFAQKTVDDNASNEDDATKSPLKSSGGRGGRGGSAAVSGGRG
RGVGRGGFMNFGERKDPPHKGEKDVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHG
GRITGSVSKKTNYLLCDEDIEGRKSSKAKELCTPFLTEDGLFDLIRSSNAKASVQKEAKK
PIEKVALLPKTSPKKAEVKSTSVTSTTIVSHKDSIAGTFPAKRKEQTTKLNSLSWTEKYR
PKAPNDIVGNQTLVNQLHNWLKNWNQQFLNAGNRGKSKKQNDSSAKKAVLLSGTPGIGKT
TSAKLVAQMLGFQAIEVNASDSRGKADSKINKGIGGSNANCIKELVSNEALGVNMDRSKH
PKTVLIMDEVDGMSAGDRGGIADLIASIKISKIPIICICNDRYSQKIKSLVNYCLLLSFR
KPTKQQMAKRLMQVANAEGLQVNEIALEELAERVNGDLRMALNQLQYMSLSMSVIKYDDV
RQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDLDLVPLLIQENYINYRPS
SVCKDDNGMKRMSMIARAAESIADGDIINVQIRRYRQWQLSQSGSVASCIIPAALLHGQR
ETLEQGERNFNRFGGWLGKNSTMGKNLRLLEDLHVHLLASRESNLGRDTLRLQYFTLLLK
QLTEPLRILPKDEAVEKVVEFMNVYSISQEDIDTIVELSKFQGHKNPMDGIPSAVKAALT
RAYKGNKLMLRAADLVPLPGVKKAPKKRIATILESSDDGVAGEDGDALAESEEQNSSDAE
DLEGTVNGEKLQSELDSLNSKGIKVEMELKGTANSNAKRTPSSRGKGGAASSAEKKPAGR
GKECSGSTEKAGSKRKR
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggagatattaggaaatggtttatgaaggcccatgacaaaggcaatggcactgct
gcaaagtctgcacaacctgcaacagatatcaaacttccttcagttgaatccaagcctgaa
ttccctgtacaaggaggacaagataattcaggcagaaggaaaactagcaagtattttgca
aaggataaacaacagtcaaaagctgaaaaagaaatcgaggaacttccagcaaagagaaaa
gctcgaaatggcagtgaccgatcaacgaaaacacctccttcaaagaaagttcacaaaatt
gaggacaatgaagatgatgatgacgacgacgacgacgactttgtcatgcctgataaaaag
aagagtgctggtgaggtcactcccagtaagaaatcgaagaatggttcaggtagaggtttt
gctcagaaaacggttgatgacaatgctagtaatgaagatgatgcaaccaaatctcctctt
aagtctagtggaggccgtggcggaagaggtggatcagcagcagtgtctggtggaagaggc
agaggagttggacggggtggatttatgaattttggtgaaaggaaagatcctccgcacaaa
ggagaaaaggatgtccctgaaggtgctcctgattgtttagctggtctgacttttgtaatt
agtgggacacttgacagtttagaaagagaagaagcagaagatctgattaaacggcatgga
ggccgcattactggatctgtcagcaagaaaactaattatcttttatgtgatgaggatatt
gagggacggaaatctagcaaagccaaagagctttgtactcccttccttacagaggatgga
ttatttgatttgatacgatcatctaatgcaaaggcttcagtgcaaaaagaggcaaagaag
cctattgagaaagttgcacttctgccaaagacaagccctaagaaagcagaagtgaaaagt
acgagcgtcacttcaacaacaattgtgagtcacaaagattcaattgctggtacctttcct
gcaaagagaaaagaacaaactaccaaactcaattctctttcatggacagaaaaatataga
ccaaaggctccaaatgatattgttgggaatcagacactggttaaccaactacataattgg
ttaaaaaattggaatcagcagttccttaatgctggaaacaggggaaagagcaagaaacaa
aatgattctagtgccaaaaaagctgtgctattgagtgggacacctggtatagggaaaacg
acatcagcaaagcttgttgctcagatgctaggtttccaagcaattgaggtgaatgccagt
gacagtagaggaaaggcagattccaagattaataagggaattggtggaagcaatgcaaac
tgtataaaggaacttgttagcaatgaagctttgggtgttaatatggataggtcgaagcat
ccaaaaacagttctaatcatggatgaagtagatgggatgtctgccggagatagaggtgga
attgctgatcttattgctagcataaagatatccaaaattcctataatctgcatttgtaat
gatcgttacagtcagaaaattaaaagtctagtgaactactgcttgctactcagtttccgg
aaacctacaaagcaacagatggcaaaaaggttaatgcaagttgcaaatgcagagggcctt
caagttaatgagatcgctcttgaggaacttgcagaaagagtgaatggagatttgcgcatg
gcactaaaccaattgcaatatatgagtctctccatgtcagtcattaaatatgatgatgtt
agacagcgccttcttagcagtgcaaaggatgaagatatttctcccttcacagctgttgac
aagctttttggctttaatggaggtaagctgagaatggatgagcggattgacctcagcatg
agtgatcttgatttagttcctcttcttattcaggagaattatattaattataggccaagt
tcagtttgtaaggatgacaacgggatgaaacgaatgagcatgattgcccgtgctgctgag
tctattgctgatggagatataataaacgtgcagattcgaagatatagacagtggcaactc
tctcaatctggttcagtagcatcctgtattattcctgctgcattgttgcatggacagagg
gagacacttgaacagggagaaaggaactttaacagatttggtgggtggctgggtaagaac
tcaactatgggaaaaaatctgaggcttttggaggatttgcatgtccaccttcttgcttct
cgtgaatctaatttgggaagggacactcttcgccttcaatattttactcttcttttaaaa
caattaactgagcctcttcggatactgcctaaggatgaagctgttgagaaggttgtggag
ttcatgaatgtttattcaattagtcaggaagacattgatacaattgtggagttatcgaaa
tttcaggggcataaaaatccgatggatggcattccatctgctgtgaaagcagcattgacc
agagcatataaaggaaacaaactgatgttacgagctgcagatttagtcccacttcctggt
gtgaaaaaggcccctaagaagcgtattgcaacaattctagaatcatctgatgatggtgta
gcaggggaagatggcgatgcattagcagaaagcgaagaacaaaactcttctgatgcagag
gacttagaagggactgtcaatggcgagaagctgcagtctgaacttgatagtttgaattca
aaaggaatcaaagtagagatggaactaaaaggcacggcaaattcaaatgccaagaggaca
ccatcaagcagaggaaaaggtggggctgcttcatctgcagaaaagaagccagcaggtaga
ggaaaagagtgttctggatccacagagaaggctggatctaagagaaagagataa
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