Ricinus communis (castor bean): 8282497
Help
Entry
8282497 CDS
T01087
Name
(RefSeq) regulator of nonsense transcripts 1 homolog
Organism
rcu
Ricinus communis (castor bean)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
DUF6469
AAA_11
AAA_19
AAA_30
Viral_helicase1
Cmr2_hel_dom2
Helicase_RecD
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
8282497
NCBI-ProteinID:
XP_015577429
LinkDB
All DBs
Position
2:10933640..10936643
Genome browser
AA seq
685 aa
AA seq
DB search
MECECSRTTQRVAMKESLIDEIYSWSFDEILDQELFKDKVEKIPDTFQQVEEYSGSFVYP
LLEETRAELASSLDNISRARYAQVLGTSKQGGTSLYDIKVDYWRNRLGIHRKDYYQTLPG
DILVFTKAKPETISDLRWHGRAWAAKLKESDGYDDDNANATCLRVKGFRGDDHVSFSLGK
KLFVVFLMNVRTHERIWKSLRFNGNLTVIKQILSSSMQDKGKNRLCTCQGNCIEIKESIM
TISSQLNESQRKVIVDILCKLQCNHRSSVELIWGPPGTGKPKTLSILLYILLRIKYRTLI
CAATDTAVQRVASRVVKLVKNSSSCSLGSILYFGDNGVAKVDTDIVEIYLNHQVKSLDSC
LRTASLVFCTASSSSMLLSGLEPLNLLIIDEATQLRECESFIPLQLQGFKHAVLIGDNCQ
LAATVTSNVSARAGFGRSLFERLTSFGCSKHTLNKQYRTHPLISSFPNFKFYANQIWDAP
YVRNKSFLKCFLPDPVFGPYSFINISCGNEELDSLRCSFKNMAELATMMKIVQILFKEWS
KSKQKLSVGIISFYTAQFVAINEKVGRRYENLEGFSLKVDTIGGFQGGEEDVIILSTVRT
SADGSSEFISNLQRINVALTRARTLADSSTVWKSIIQEAKDCKCFYNAEEDKELVDVVLQ
VKQELDKLDDVLNADSTLFKNHLQS
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtgaatgttcaagaaccacacagagagttgccatgaaagaaagtttgattgat
gaaatttattcttggtcttttgatgaaattcttgatcaagaactgttcaaagacaaggta
gagaagattcctgacacgtttcaacaagtagaagaatattctggatcgtttgtataccca
ttattggaagaaacaagggctgaacttgcttcaagtcttgataacatatcaagagcacgt
tatgctcaagttcttggaacttctaaacaaggtggaacatcgctatatgatatcaaagtt
gattattggagaaataggcttggaatacatagaaaagactattaccagacattgcctgga
gatatcttggttttcacaaaagctaaacctgaaactatttccgatttgagatggcacgga
agggcatgggctgctaaacttaaagagagtgacgggtatgatgatgataacgctaatgca
acttgtcttcgagtcaaaggttttagaggtgatgatcatgtcagtttttcactagggaag
aaattatttgtagttttcttgatgaatgtcagaacacatgaaaggatttggaaatctctg
cgattcaatggaaatttgactgttattaagcaaatcttgagctcttctatgcaggataag
gggaagaataggctttgtacctgccaaggaaattgcattgaaattaaagaatcaattatg
accatctcatctcagctgaatgaatcacaaagaaaagtaattgttgatattctttgtaaa
ttgcaatgcaatcacaggtcttctgtagaacttatatggggtcccccagggactggaaaa
cctaaaactctgagtatcttgctttacattctcttgagaataaagtataggactctcatc
tgtgccgcaacagatactgcagttcaacgagtggcatctcgtgttgtaaagctggtaaag
aactcttcctcatgttcattgggaagcattctctattttggggataatggtgttgcaaaa
gttgatacagacattgtagagatatatttaaatcatcaagtcaaaagtctggatagttgc
ttacgaactgcttccttggtattctgcactgcctcaagttcatccatgctgctttcaggg
ttagagcccctaaacttgttaatcattgatgaggccacacaattaagagagtgcgaatca
ttcatacctttgcaattgcaaggatttaagcatgctgtactcattggagataactgtcag
ctagcagcaacggttactagcaatgtttctgctagagctggctttgggaggagtttgttt
gaaaggttgacttcatttggttgttcaaagcatactctgaataagcagtacagaacgcat
cctcttatcagttcttttcctaatttcaaattctatgcaaaccagatttgggatgctcca
tatgttagaaacaaaagttttttgaagtgctttctccctgatccagtatttggtccatat
tcatttataaatatttcttgtggaaatgaagagctggatagcctgagatgtagcttcaaa
aatatggctgaacttgcaactatgatgaaaattgtgcaaatattgttcaaagaatggagc
aaatcgaaacaaaagcttagtgttggcatcatatctttctacacggcacaatttgttgca
atcaatgaaaaagttggacggaggtacgagaacttagaaggattttcactgaaagtggat
acaataggtggcttccaaggtggtgaggaagatgtaataatattgtctactgttcgtact
agtgctgatggatcaagtgagttcatttccaatctgcagagaattaatgtagctttgaca
agagcaagaactcttgctgatagtagcactgtttggaaatccattatccaagaggctaag
gattgcaagtgtttttacaatgctgaagaggataaggaattggttgatgttgtgctacag
gtaaagcaagaacttgataagcttgatgatgtcctaaatgcagacagcacacttttcaaa
aatcatttgcaaagttga
DBGET
integrated database retrieval system
