Roseobacter denitrificans: RD1_0512
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Entry
RD1_0512 CDS
T00376
Symbol
betA
Name
(GenBank) choline dehydrogenase
Organism
rde
Roseobacter denitrificans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
FAD_binding_2
Pyr_redox_3
NAD_binding_8
Lycopene_cycl
Pyr_redox_2
DAO
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
ABG30219
RoseoBase:
RD1_0512
UniProt:
Q16CS4
LinkDB
All DBs
Position
complement(497788..499392)
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AA seq
534 aa
AA seq
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MAQGYDYIIVGGGSAGCVLANRLTEDASVRVLLLEAGGSDRHPFIHMPVGFAKMTTGPHT
WGLMTAPQKHANNREIPYAQARVIGGGSSINAEVFTRGHPSDYDRWAREEGCDGWAFDDI
RKYFIRSEGNTVFAGEWHGTDGPLAVSSLNAQPMTLAFVRSCQERGIPFNPDFNGAVQEG
AGVYQTTTRNARRCSAAVGYLKPVMHRPNLTVRMNVLVKRVVVEKGRATGVDIWSAKTGS
ETVHADQEVIVTTGAIGTPKLMMLSGLGPAAHLKAHGIDVQADLPGVGENLTDHFGIDIV
AELTGHDSLDKYNKPHWALWAGLQYLAFRTGPVASNVVEGGAFWYADPDAATPDLQFHFL
AGAGAEAGVPSVRPGASGITLNSYTLRPKSRGTVRLRSADPKDTPIIDPNFLGHPEDLKT
SVEGVRISREIFAQPSLQKYIRAVRFPDDSVQTQAEYEAYARAFGRTSYHPTCTCKMGSS
DDPMAVVDPRLRVRGVDGLRLCDSSVMPSLIGSNTNAPTIMIGEKAADMIRGNH
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcagggctatgactatatcatcgtgggcggcgggtcggccgggtgcgtgctcgcc
aaccggctgacagaagatgcaagcgtcagggtgttgttgctggaggccggcggcagtgat
cgccacccgttcatccacatgccggtcgggttcgcaaagatgacgaccggcccgcacaca
tggggcctgatgaccgcgccgcagaaacatgccaacaaccgcgaaattccatatgcgcag
gcgcgtgtcatcggcggtggttcgtcaataaacgccgaggttttcacccgtggccacccc
agcgattacgaccgctgggcgcgggaagagggctgcgacggctgggcatttgacgatatc
cgcaagtatttcatccgctccgaaggcaacacggtttttgccggcgagtggcacggcacg
gacgggcccttggcggtatcgagcctgaatgcgcaaccgatgacccttgctttcgtgcgc
tcctgtcaggaacggggcatcccgttcaaccccgacttcaacggggcggtgcaggaaggc
gctggcgtctatcagaccaccacaaggaatgcgcggcgctgttctgcggcggtggggtat
ctcaaaccggtgatgcatcgacccaatctgaccgtgcgcatgaatgtgctggtcaagcgt
gttgtcgttgaaaaggggcgtgcgactggcgtcgatatctggtccgccaaaaccggcagt
gagacggtgcacgcggatcaggaggtcatcgtcacgacgggggcaatcggcacgccaaag
ctgatgatgttgtcggggctgggacctgcggcgcatctcaaggcccatgggatagacgtg
caggcggacttgccgggcgttggcgaaaacctcaccgatcactttggtattgatatcgtg
gcagagctgaccgggcacgacagcctcgacaaatacaacaagccgcattgggcgctttgg
gccggcctgcaatacttggcttttcgcaccggtcccgtggcgtccaacgtggttgagggg
ggtgccttctggtatgcggatcccgacgccgcaacacccgatttgcagttccattttctg
gccggggccggggctgaggcgggtgtgccctccgtgcgacccggcgcatccggcattacc
ctcaacagctatacgctacggcccaaatccagagggacggtgcggctgcgctctgctgac
ccaaaggatacgccgatcattgacccgaattttctgggccacccggaggatctgaaaacc
tctgtcgagggcgtcagaataagccgcgagattttcgcgcaacccagcctgcaaaagtac
atccgcgcggtgcgctttcccgatgacagcgtgcaaacgcaggcagagtatgaggcctat
gcacgcgcctttggtcgcacctcgtatcacccgacgtgcacgtgcaaaatggggtcttcc
gatgacccgatggcggtggttgatccacgattgcgggtgcgcggcgtggacggtctgcgc
ctgtgcgacagttcggtcatgccctctctgatcgggtcaaacaccaatgccccgacgatc
atgatcggcgagaaagccgcagatatgatccgaggaaaccactga
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