Roseobacter denitrificans: RD1_1013
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Entry
RD1_1013 CDS
T00376
Symbol
pheT
Name
(GenBank) phenylalanyl-tRNA synthetase, beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RD1_1013 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rde01007
]
RD1_1013 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rde03016
]
RD1_1013 (pheT)
Enzymes [BR:
rde01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
RD1_1013 (pheT)
Amino acid related enzymes [BR:
rde01007
]
Aminoacyl-tRNA synthetase
Class II (U)
RD1_1013 (pheT)
Transfer RNA biogenesis [BR:
rde03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RD1_1013 (pheT)
Prokaryotic type
RD1_1013 (pheT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
ABG30678
RoseoBase:
RD1_1013
UniProt:
Q16BG5
LinkDB
All DBs
Position
974748..977147
Genome browser
AA seq
799 aa
AA seq
DB search
MKFTLSWLKEHLDTSATLDEITYALTDLGLEVEGVEDRAGKLRDFTIGYVKSAEKHPDAD
RLKVCQVATDEGDKQIICGAPNAREGITVVVAKPGVYVPGIDTTIGVGKIRGIESFGMMA
SEREMELSEEHDGIIELPSGEVGRSFVDWLAEHDPAKVDPVIEIAITPNRPDALGVRGIA
RDLAARGLGTLKPRDVAAVEGVFPCPVSITIEADTLEQCPVFFGRVIRGVKNGPSPQWLQ
DKLRAIGLRPISFLVDVTNFFTYDRNRPLHVFDADKIEGKTLRVHRAKGGETLVGLDEKE
YTFAEGMTLISDAANVESIAGVMGGLATGCTAETTNVFIEAAYFDPVRTAYTGRALKINS
DARYRFERGIDPEWTPYGIEHATHMILEHAGGEPSEVIVAGKIPDTNRAYKLDAARVQSL
VGMDIPESSQRQTLTALGFRLEGNMAHVPSWRPDVQGEADLVEEVARIASLTKLKGRPLP
RLDEGVSRPILSPIQRREAMARRTCAALGYNECVSYSFIDQASAKLFGGGEDVTRLENPI
SSDMSHMRPALLPGLLQAAARNQARGNMNLALFEVGPAFHGGEPGEQHLLVSGVLIGRTE
PKDVHGASRAVDVYDVKADAEAVLAAIGAPAKVQILRGAAPWWHPGRHGMICLGPKKVLG
VFGEIHPRVLAAMDVKGPAMGFTIWPAEVPLPRKSGATRAALQISDLQAVERDFAFVVDS
GVEALTLVNAAMGADKALIEDVRVFDEFIGGSLGEGKKSLALTVRMQPATQTLTDKDIEA
VSAKVVEKVIKATGGTLRA
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcacactctcttggctcaaagagcatcttgatacctctgccacgctggacgag
atcacctatgcgctgaccgaccttggtcttgaggtcgaaggggtcgaggaccgtgcgggc
aagctgcgggactttactatcggttacgtcaaatcagcggaaaaacacccggatgcggac
cgcctcaaggtctgtcaggtagcgactgatgagggcgacaagcagatcatttgcggcgcc
ccgaatgcgcgcgaaggcatcaccgtcgtcgtggcgaaacccggcgtctatgtgcccggt
attgataccaccatcggcgtgggcaaaattcgcgggatcgaaagctttggcatgatggcc
tccgagcgcgagatggagctgtccgaagaacacgacggcatcatcgaattgccgagcgga
gaggtcgggcggtctttcgtcgactggctggcagagcatgacccggccaaggttgacccg
gtgatcgagatcgcgatcaccccgaaccggcccgatgcgctcggtgtgcgcgggatcgcg
cgtgatctggcggcgcgcggccttggcacgttgaagccgcgcgatgttgccgccgtcgaa
ggggtcttcccctgtccggtgagcatcaccatcgaggcggatacgctggagcagtgtccg
gttttctttggccgggtgatccggggtgtcaagaacggcccaagcccgcagtggctgcag
gacaaactacgcgccatcggtctgcgcccgatttcgttcctcgtcgatgtgacgaacttc
ttcacctatgatcgcaaccgccccctgcacgtctttgacgccgacaagatcgaaggcaaa
accctgcgggtccatcgcgccaagggtggcgaaaccctcgtggggctggacgaaaaggaa
tatacctttgcagaaggcatgacgctgatctctgacgcggccaatgtggaaagcatcgcg
ggggtcatgggcggccttgcgacgggctgcaccgcagagaccacgaatgtctttatcgaa
gcggcctatttcgatccggtccgcacggcctataccggtcgcgcgctgaagatcaattcc
gacgcgcggtatcggtttgaacggggcatcgacccggaatggacgccctacgggatcgaa
catgcaacgcatatgatccttgagcatgcaggcggtgagccctccgaggtcatcgtggcg
ggcaagatacctgacaccaaccgggcctataaactggatgccgcgcgggtgcagtcgctg
gtgggcatggacatccccgaaagcagtcagcgccagacgctgaccgcgctggggttccgc
cttgaaggcaacatggcccatgtgccaagctggcgcccggatgtgcagggcgaagcggat
ctggtcgaagaagtggcgcggattgcctcgcttaccaagctgaaaggcagaccgctgccc
cggctggatgaaggcgtgtcgcgcccgatcctgtcgccgatccagcggcgcgaagccatg
gcacggcggacctgcgcggccttggggtacaacgaatgtgtcagctacagctttattgat
caggcctctgccaagctgttcggtggcggagaggacgtcacccggctggaaaacccgatc
agcagcgacatgagccacatgcgtcccgcattgcttcccggtctcttgcaggcggcagcg
cgcaatcaggcgcggggcaatatgaacctcgcgctgtttgaggtcggccctgcctttcac
ggcggcgaacccggagagcagcatttgctggtcagtggggtgctgatcgggcggacggaa
cccaaggatgtgcatggtgcgtcccgcgctgttgacgtctatgatgtcaaagcggatgcg
gaagcggttctggcggccatcggtgcacctgccaaggtacagattttgcgcggtgccgcc
ccgtggtggcatcccggtcggcatgggatgatctgtctggggcccaagaaagttctgggt
gtattcggcgaaatccacccgcgtgtgttggcggcgatggacgtcaaagggcccgcgatg
ggctttaccatctggccggccgaggtgccgctgccccgcaagagtggcgcgacccgtgcc
gcattgcagattagcgacctgcaggcggtggagcgcgatttcgcctttgttgtcgatagc
ggtgtggaggcactgaccctcgtcaacgcggcaatgggggctgataaggcgctgatcgag
gatgtgcgcgtctttgatgaatttatcggcggctctttgggggaaggaaagaaatccctt
gcgctgacagtgcggatgcaacccgcgacccagacgctgaccgataaagacatcgaagcg
gtcagcgcaaaggtcgtggaaaaggtgatcaaggccacgggtggaacgctgcgcgcctga
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