Roseobacter denitrificans: RD1_1225
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Entry
RD1_1225 CDS
T00376
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00260
Glycine, serine and threonine metabolism
rde00630
Glyoxylate and dicarboxylate metabolism
rde00785
Lipoic acid metabolism
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01200
Carbon metabolism
Module
rde_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RD1_1225 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RD1_1225 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RD1_1225 (gcvP)
Enzymes [BR:
rde01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
RD1_1225 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ABG30873
RoseoBase:
RD1_1225
UniProt:
Q16AX0
LinkDB
All DBs
Position
1189446..1192295
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AA seq
949 aa
AA seq
DB search
MSFKPIDYLPYDFANRRHIGPSPAEMTQMLEVTGAANLDALMDDTLPAAIRQKEPLAFGK
AMSEREVLEHLRRVASKNQVLTSLIGQGYYGTVTPPAIQRNILENPAWYTAYTPYQPEIS
QGRLEALLNFQTMVSDLTGLEVANASLLDEATACAEAMTMAQRVSKSKSKAFFVDRDCHP
QNIAVMQTRAAPLGIEIIVGNPDKMDAEAVFGAIFQYPGTYGHVNDFTDHMAALHAHKAI
GIVSADPLALTLLKEPGAMGADIAVGSTQRFGVPEGYGGPHAAYMACRDAYKRAMPGRIV
GVSVDSHGHRAYRLSLQTREQHIRREKATSNVCTAQALLAVMASMYAVFHGPEGLRAIAQ
RIHRKAVRLAKGLEEAGFTVDPQAFFDTITVDVGPLQAAVMKSAVDEGINLRRVGETRVG
ISLNERCRPDTLEAVWRAFGITRADNDFRPDYRFPEEMLRTSDYLTHPIFHMNRAETEMM
RYMRRLSDRDLALDRAMIPLGSCTMKLNSAAEMMPVSWRDFSLLHPFAPVDQAKGYTEMI
DDLSAKLCQITGYDQISMQPNSGAQGEYAGLLSIAGYHRANGEAHRNICLIPMSAHGTNP
ASAQMVGWTVVPIKSADNGDIDMADFAAKAEQHAANLAGCMITYPSTHGVFEETVTEVTR
ITHQHGGQVYIDGANMNAMVGLSRPGDLGGDVSHLNLHKTFCIPHGGGGPGMGPIGVKSH
LAPFLPGHEMTGGGEGAVSAAPFGSPSLLPISWAYCLMMGGDGLTQATRVAILNANYIAK
RLEGAFDVLYRGPTGRVAHECVIDVRPFEKSAGVSVEDIAKRLIDCGFHAPTMSWPVAGT
LMVEPTESETKAELDRFCDAMLAIRAEIADIEEGRMDAANNPLKNAPHTVDDLVSDWDRP
YSRDQGCFPPGAFRVDKYWPPVNRVDNVFGDRHLVCTCPPMEDYAEAAE
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcaagccgatagactatctgccctatgattttgccaaccggcgccatattggc
ccatcccctgcggaaatgacgcagatgctggaggtgacgggtgctgcaaaccttgatgcg
ctgatggatgatacgctgcccgccgcgatccgccagaaagagccattggcttttggcaag
gcgatgtcggaacgtgaggtgctggagcatctgcgccgggtcgcgtcaaagaaccaggtg
ttgacgtcgctgatcgggcaggggtattacggcacggtcacaccgcccgcgatccagcgc
aatatccttgaaaacccggcgtggtatacggcctataccccctatcagcccgagatttcg
caaggccgcctcgaagcgcttttgaacttccagaccatggtttccgatctgaccgggctt
gaggttgccaacgcatccctgttggatgaggccaccgcctgtgccgaggcgatgaccatg
gcgcagcgggtgtcgaaatccaaatccaaggcgttcttcgtggaccgggattgccacccg
cagaacatcgccgtgatgcaaacccgcgccgcccccttgggcattgagattatcgtcggc
aatcctgacaagatggacgccgaagccgtctttggcgcgatctttcagtatcccggcacc
tatggtcatgtgaatgatttcaccgaccatatggcggcgttgcatgcccataaggcgatc
ggcatcgtatcggctgacccactggcgctgacgctgttgaaagaacccggcgcaatgggc
gcggatatcgccgtcggctcgacccagcggtttggtgtgccagagggctatggcgggccg
cacgcggcctatatggcctgccgggatgcctataaacgcgccatgccagggcgcatcgtg
ggcgtgtctgtcgacagtcacgggcaccgggcctaccggttgtcgctgcaaacgcgcgag
caacacattcggcgcgaaaaggcaacgtccaatgtctgcacggcacaggcgctgctggcg
gtcatggcgtccatgtatgcggtgttccacggacccgaaggcctgcgcgccatcgcgcag
cgcatccaccgaaaagccgtgcgccttgcaaaagggctggaagaggccgggttcacagtc
gatccgcaagcgtttttcgacacgatcacggtggacgtggggccgttgcaggcagcggtg
atgaaatcggcggtggatgaagggatcaacctgcggcgcgtgggggaaacccgcgtgggc
atcagcctcaacgaacgttgccgcccggatacgcttgaggcggtctggcgcgccttcggc
atcacgcgggccgataatgattttcggcccgactaccgctttccagaagaaatgctgcgc
acgtccgattatctgacgcatccgatctttcacatgaaccgggccgagaccgagatgatg
cgctacatgcgtcgcctgtccgaccgggatctggcgcttgaccgggcgatgatcccgctg
ggctcctgtacgatgaaactgaattcggcggcagaaatgatgccggtcagctggcgcgat
ttttcgctgctgcatccctttgcgccggtggatcaggccaaaggctatacagagatgatt
gacgatctgagcgccaagctgtgccagatcaccggctatgaccagatttcgatgcagccg
aattccggcgcgcagggggaatacgccggactgctgagtattgcgggctatcaccgcgcg
aatggggaagcgcatcgcaacatctgcctgatcccgatgagcgcgcatggcaccaaccct
gcatcggcccagatggtgggctggactgtcgtgccgatcaaatcggcggacaatggcgat
atcgacatggcagattttgccgccaaggccgagcaacatgccgccaaccttgcgggctgc
atgatcacctatccctccacccatggggtgttcgaagagaccgtgaccgaggttacacgg
atcacccatcagcatggcggtcaggtctatatcgacggggcgaatatgaacgcgatggtg
gggctgagccgtccgggcgatctgggcggggatgtgagccatttgaacctgcacaagacc
ttttgcatcccgcatggcggcggtgggccgggcatggggccgattggcgtcaaatcccat
cttgcgcctttcttgccggggcatgagatgaccggcgggggggaaggggctgtttcggca
gcgccattcgggtcgccttcgttgttgccgatcagttgggcctattgcctgatgatgggc
ggggatggtctgacgcaagcgacgcgggtcgcgatcctgaacgcgaattacatcgccaaa
cggcttgagggcgcgttcgacgtgctttatcgcgggccgacgggacgggtggcgcatgaa
tgtgtgattgatgtgcgcccctttgaaaaatccgcgggtgtgagcgtcgaagacattgca
aaacgtctgatcgactgcgggttccatgcgccaacgatgagctggcccgtggcggggaca
ctgatggttgagccaaccgagagcgaaaccaaggccgaactggaccggttctgtgacgca
atgctcgcgatccgcgccgaaatcgctgacatcgaagagggccgcatggacgctgcgaac
aacccgctgaaaaacgcgccccacactgtcgatgacctcgtcagcgattgggatcgcccc
tacagccgcgatcaggggtgtttcccgccaggcgcattccgcgtggacaaatactggccg
ccggtcaaccgggtcgacaatgtgtttggtgatcggcatctggtttgcacctgcccgccc
atggaagactatgccgaagcagcggagtag
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