Roseobacter denitrificans: RD1_1280
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Entry
RD1_1280 CDS
T00376
Symbol
rsmC
Name
(GenBank) ribosomal RNA small subunit methyltransferase C, putative
KO
K00564
16S rRNA (guanine1207-N2)-methyltransferase [EC:
2.1.1.172
]
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rde03009
]
RD1_1280 (rsmC)
Enzymes [BR:
rde01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.172 16S rRNA (guanine1207-N2)-methyltransferase
RD1_1280 (rsmC)
Ribosome biogenesis [BR:
rde03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RD1_1280 (rsmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTS
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_31
UPF0020
Methyltransf_23
Cons_hypoth95
MTS_N
PrmA
FtsJ
Methyltransf_18
CMAS
Motif
Other DBs
NCBI-ProteinID:
ABG30926
RoseoBase:
RD1_1280
UniProt:
Q16AR7
LinkDB
All DBs
Position
1242906..1243856
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AA seq
316 aa
AA seq
DB search
MLPDAGQITVVKPPLDARLMELPRDRTCIVEGFKPAHEAWKARGYPCEAEFGGSHATTII
CLPRAKKDARALIAQAMAPGAEMVIIDGQKTDGIDSILRDMRKRVEVSAPISKAHGKLFW
CMAPDAELFEDWRDGPALTEGGFWTAPGVFSADAIDPASALLVDALPDKLGHEVADLGAG
WGFLSAHILTRADVEAVHLVEAEHMALECARRNVTDPRAVFHWADATAWTPGRKVDAVVM
NPPFHTSRTADPALGQAFVRAAAAMLKPQGQLWMVANRHLPYEQCLQDSFANCFEIGGDT
RFKLFHAARPKRQVRR
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcctgacgccggccaaatcacggttgttaagccgccgcttgacgcgcgacttatg
gaactgccgcgtgatcggacgtgcattgtcgagggattcaaaccggcccatgaggcgtgg
aaagcgcgcggatacccctgtgaggcggagtttggcggatcacatgccaccaccatcatc
tgtctgccgcgcgccaagaaagatgcgcgcgccttgattgcgcaagctatggcgccgggc
gcggaaatggtcatcattgacggtcaaaaaaccgacggtatcgacagcattctgcgggac
atgcgcaagcgtgtggaggtttccgcgccgatctccaaggcccatggcaagcttttctgg
tgtatggcaccggatgcggaactttttgaagactggcgggatgggccggccttgaccgag
ggtgggttctggaccgcgcctggtgttttttcggcggatgcgattgatccggcctccgcc
ctgctggtggatgcgctgccggataaactggggcatgaggttgctgaccttggcgcgggg
tgggggtttttgtctgcccatatcttgacccgtgcggatgtcgaagcggtgcacctcgtg
gaggcggagcatatggcgctcgaatgcgcacggcgaaatgtcactgacccgcgcgctgtc
ttccactgggccgatgccaccgcgtggacgcccgggcgcaaagtggatgccgtggtgatg
aacccgccgtttcatacatcccgcacggctgatcccgcattggggcaggcgtttgtgcgg
gcagcggcggcgatgctcaagccgcaggggcagctctggatggtggcaaaccgtcatttg
ccctacgagcaatgcctgcaagacagctttgcaaattgctttgaaattggtggtgatacg
cgctttaaactgttccatgcagcgcgccccaaacgacaggtccggcgctag
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