Roseateles depolymerans: RD2015_2385
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Entry
RD2015_2385 CDS
T04166
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RD2015_2385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rdp03400
]
RD2015_2385
Enzymes [BR:
rdp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RD2015_2385
DNA repair and recombination proteins [BR:
rdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RD2015_2385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ALV06856
UniProt:
A0A0U3CDQ9
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All DBs
Position
complement(2793412..2794185)
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AA seq
257 aa
AA seq
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MKLATWNVNSLAVRLPQLLDWLAANPVDAIVLQETKLTDDKFPAKEIQDAGYQVQWFGQK
TYNGVALISKEPATDIARNILGYADEQARVISGTVAGVRVIGAYFPNGQAPDSEKFVYKM
AWLDGLRAQVKEELKTHPNLVLMGDFNIAPEDRDVYDPVAWAGQIHCTPQEREHFQQLLA
AGLVDAFRLFEQPPKSWSWWDYRNLAFRKNQGLRIDHILVSEALKPRVTACVIDKAPRKN
ERPSDHAPVIVTLDTAA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgccacctggaacgtcaactccctcgcggtgcggctgccgcaactgctggac
tggctcgccgccaacccggtcgatgccatcgtgctgcaggagaccaagctgacggacgac
aaattccccgccaaggaaatccaggacgctggctaccaggtgcaatggttcggccagaag
acctacaacggcgtcgccctcatcagcaaggagcccgccaccgacatcgcccgcaacatc
ctgggctatgccgatgaacaggcccgggtcatctccggcacggtcgccggcgtacgggtc
atcggcgcttacttccccaacggccaggcgccggacagcgagaagttcgtctacaagatg
gcctggctggacggcctgcgcgcgcaggtgaaggaagagctcaagacccatcccaacctg
gtgctgatgggcgacttcaacatcgcccccgaagaccgcgacgtctacgacccggtcgcc
tgggccggacaaatccactgcacgccgcaggagcgggaacatttccagcagctgctggcg
gccggtctcgtcgatgccttccggctcttcgagcaaccgcccaagagctggagctggtgg
gactatcgcaacctcgccttccgcaagaaccagggcctgcgcatcgaccacatcctggtg
agcgaagcgctcaagccgcgggtcacggcctgcgtcatcgacaaggcaccgcgcaagaac
gaacggcccagcgaccacgcaccggtcatcgtgacgctggatacggcggcctaa
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