Rhodococcus erythropolis BG43: XU06_09880
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Entry
XU06_09880 CDS
T03842
Name
(GenBank) ribonuclease N
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
reb
Rhodococcus erythropolis BG43
Brite
KEGG Orthology (KO) [BR:
reb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
reb03019
]
XU06_09880
03016 Transfer RNA biogenesis [BR:
reb03016
]
XU06_09880
Enzymes [BR:
reb01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
XU06_09880
Messenger RNA biogenesis [BR:
reb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XU06_09880
Transfer RNA biogenesis [BR:
reb03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
XU06_09880
Prokaryotic type
XU06_09880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Velvet
SpoIIIAH
FMP27-BLTP2_C
Motif
Other DBs
NCBI-ProteinID:
AKD97025
LinkDB
All DBs
Position
2153970..2154518
Genome browser
AA seq
182 aa
AA seq
DB search
MPSAKTRNAIITVVVAVVALVLAVTLSSRDSDSSASSVTKSSSAQSSTVQAKPGATTKAA
PSSSVPSSSAPSSSAPSSSAVKTTQQTNSDAPTRVLATLVEIDAGRWPDSANAPGTKGGI
TFRNSEGRLPAVGAGGGRVVYQEWDVNAKKNGQGRDAERIVTGNDGSAWYTLDHYDTFVR
IR
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcgcaaagacgcgcaacgccatcatcaccgtcgtggtggcggtggtggcgctc
gtgctggcggtcaccctgtcttcacgtgactccgacagttcggcgtcgtcggttacgaag
tcctcgagtgcccagtcctcgactgttcaagccaagcctggtgctactaccaaggccgcg
ccgtcgagttccgtgccctcgagctccgcgccctccagctccgcgccctccagctccgcc
gtcaagacaacgcagcagacgaacagcgatgcgccgacgcgcgttctcgccacgctcgtg
gagatcgacgccgggcggtggccggattccgccaatgcgccgggcaccaagggcggcatc
accttccgcaacagcgaagggcgtctgcccgctgtcggtgccggtggcggacgtgtcgtc
tatcaggaatgggacgtcaacgcgaagaaaaacggccaaggtcgtgatgccgagcgaatc
gtcaccggtaacgacggttcggcgtggtacaccctcgatcactacgacacgtttgtgagg
attcgctga
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