Rhizobium etli CIAT 652: RHECIAT_CH0001584
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Entry
RHECIAT_CH0001584 CDS
T00720
Symbol
rfbB
Name
(GenBank) dTDP-glucose-4,6-dehydratase protein
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec00521
Streptomycin biosynthesis
rec00523
Polyketide sugar unit biosynthesis
rec00525
Acarbose and validamycin biosynthesis
rec00541
O-Antigen nucleotide sugar biosynthesis
rec01100
Metabolic pathways
rec01110
Biosynthesis of secondary metabolites
rec01250
Biosynthesis of nucleotide sugars
Module
rec_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
RHECIAT_CH0001584 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RHECIAT_CH0001584 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
RHECIAT_CH0001584 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RHECIAT_CH0001584 (rfbB)
00525 Acarbose and validamycin biosynthesis
RHECIAT_CH0001584 (rfbB)
Enzymes [BR:
rec01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
RHECIAT_CH0001584 (rfbB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
KR
NmrA
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
ACE90562
UniProt:
B3PVC1
LinkDB
All DBs
Position
complement(1574480..1575535)
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AA seq
351 aa
AA seq
DB search
MRILVTGGAGFIGSALVRHLVSEIGAEVLNVDALTYAGNRASLKSVESAPNYQFLHADIC
DRARMQEAFASFRPDIVMHLAAESHVDRSISGAADFIQTNIVGTFSLLDAARHYWDGLDA
RGKSAFRFLHVSTDEVYGSLGDQGLFEETTPYDPSSPYSASKAASDHLAIAWHRTYGLPV
VVSNCSNNYGPFHFPEKLIPLMILNALEGKPLPVYGNGANVRDWLYVEDHARALYSIAST
GRPGEKYNVGGRNERRTIDVVHRICAILDGVHSDKAPHARLITNVTDRPGHDARYAIDAS
KLESELGWKAQETFETGIEKTVHWYLDNEWWWRPLRENVYSGERLGVFKEQ
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatactggttacgggcggagcgggcttcatcggatcggcgttggtgcgccatctc
gtcagcgagatcggcgccgaggtgctgaatgtcgacgcgctgacctatgccggcaaccgc
gcctcgctgaaatccgtcgaatcggctccgaactatcaattcctgcacgccgacatctgc
gaccgcgccagaatgcaggaagcattcgcgtccttccgccctgatatcgtcatgcatctt
gcggcagagagccatgtcgaccgctcgatctcgggcgctgccgatttcattcagaccaat
atcgtcggcacattcagcctgctggatgccgcacggcactattgggacgggcttgacgcg
cgcggcaagagcgccttccgctttctgcatgtctcgacagacgaggtgtacggctcgctc
ggcgaccagggcctcttcgaggagacgacgccttacgatccgtcctcgccctactccgcc
tccaaggccgcaagcgaccatctggcgatcgcctggcaccgcacctacggcctgccggtc
gtcgtctccaactgctccaacaactacggccccttccatttcccggaaaaactcattccg
ctgatgatcctgaacgcactggagggcaagcctcttccggtttacggcaatggcgcgaat
gtccgcgactggctctatgtcgaagaccacgcccgcgcgctctactcgatcgcatccacg
ggccgccccggagaaaaatacaatgtgggcggccgcaatgagcgcaggaccatcgatgtc
gtccatcgcatctgcgctattctcgacggcgtccatagcgacaaggcaccgcatgcgcgt
ctgatcaccaacgtcacggaccgcccaggacacgacgcacgctatgcgatcgatgcctcg
aaactcgaaagcgaactcggctggaaggcgcaagagaccttcgaaaccggcatcgagaag
acggtgcactggtacttggacaacgaatggtggtggaggccgctgcgcgaaaacgtctat
tccggcgaacgcctcggcgttttcaaggaacaataa
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