Rhizobium etli bv. mimosae Mim1: REMIM1_PF00144
Help
Entry
REMIM1_PF00144 CDS
T02778
Name
(GenBank) leukotoxin secretion transporter ATP-binding protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel02010
ABC transporters
rel03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
REMIM1_PF00144
03070 Bacterial secretion system
REMIM1_PF00144
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rel02000
]
REMIM1_PF00144
02044 Secretion system [BR:
rel02044
]
REMIM1_PF00144
Transporters [BR:
rel02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
REMIM1_PF00144
Secretion system [BR:
rel02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
REMIM1_PF00144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Peptidase_C39
ABC_ATPase
AAA_21
AAA_16
AAA_29
AAA_22
MeaB
AAA_18
DUF87
AAA_30
nSTAND3
AAA_25
nSTAND1
NB-ARC
RsgA_GTPase
PRK
Motif
Other DBs
NCBI-ProteinID:
AGS25814
UniProt:
S5SW91
LinkDB
All DBs
Position
pRetMIM1f:150720..152891
Genome browser
AA seq
723 aa
AA seq
DB search
MGSIDAGIANAPAQPLDGGLRALCGIAAFYRIAADPNHLHHELSLGSRVASEREILRAAA
ALGLKARTTVKLTEARLKTLPVPAIVRLSEGTFAVLGGPMASGLYRLVDPVTRVDREVTA
SDLLRECGASAILIARKLGGGGTDPRTFGLKWFLPSIWRYRKPLAHVLVASLFVQIFALV
TPLFFQVVVDKVLTHKGYSTLFVLVAGIAIIGLFDVVLQYLRTYALSHTTNRIDVELGQR
LFRHLLRLPLDYFETRSAGQTVARVRELETIRNFLTGQGLFAAIDLVFAIVFLCILWLYS
WSLTLIVLGSIPLYAVVGILVRPPLREMVKEKFNRGAVSQQLLVETIIGIQTVKSSAVEP
VMQAQLEEKLAAYVKTAFGTTLLGAGGQNVIQYISKLSSALLLLFGARAVINGDLSVGSL
VAFNMIAGQATAPVLRLSQLWQDFQQVQISIDRLGDILNTPVERTPATRLTLPPPKGSIE
FRNVTFRYRPGSQDILKRINLHIRPGEVVGIVGASGSGKSTLTKLIQRLYLASEGQVLLD
GMDISQTDPAWLRSHIGVVLQENLLFNRTIHENISLANPALPRAQVMTAARLSGADEFIS
RLPQGYDTLIEERGANLSGGQRQRIAIARALATNPPLLIFDEATSALDYESERVVQENMR
HIVQGRTVVIIAHRLAAVRNCNRIIGMADGHIVEMGTHEELLRKSDGLFARLWALQNDAR
VYG
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcattgatgctggtatcgcaaatgctccggcgcagccgctcgatggtggactg
cgcgcgctgtgcgggatcgcagccttctacaggattgcagccgaccccaatcacctccat
catgaattgtcactcggcagtcgggtggcgagcgagcgtgagattcttcgcgcggcagcg
gcacttgggctcaaggcacgaacgaccgttaagctgaccgaggcgcggctgaaaactttg
ccagtgcccgctatcgttcgcctctccgaaggaacctttgccgttttgggaggcccgatg
gcgtcgggcctctaccggctggtcgacccggtcacgcgcgtagatcgtgaagtcaccgcg
agcgatcttctccgcgaatgcggcgcttcggcgatccttatcgcccgaaagcttggcggt
ggcggaacagatccccggacattcgggctgaagtggtttctgccctcgatctggcgctac
cgcaaaccgctggcacatgtacttgtcgcctcgctcttcgtccaaatcttcgcgctggtg
acgccattgttcttccaggtggtggtcgacaaggtcctgacgcacaaaggctactcgacg
cttttcgtcctcgtcgccggcattgcgatcatcgggctcttcgacgtcgtgctgcagtat
ctgcggacctatgcactttcccacaccaccaaccgcatcgacgtcgaactcggacaacgg
cttttccggcacctgcttcgcctgccgctcgactatttcgagacccggtccgctggacag
acggtcgcccgggtaagagagctcgagacgatcaggaatttcctgacggggcaggggctt
ttcgccgcgattgatctggtctttgcgatcgtgttcctctgcatcctttggctctattcc
tggagcctgacattgatcgttctcggctcgatcccgctctacgccgttgtcggaattctc
gtccgcccgcccctccgtgaaatggtcaaggagaagtttaatcgcggcgcggtcagccag
cagctcttagtcgagacgatcatcggcatacagaccgtcaagtcttcagcggtcgagccg
gtgatgcaggcgcaattggaagagaagcttgcggcctatgttaagaccgcattcgggacg
acattgcttggcgccggcgggcagaacgtcatccagtatatcagcaagctttcgagcgcg
ctgctgctgctcttcggcgcgcgggccgtgatcaatggcgacctgtcagtcggttcgtta
gtcgccttcaacatgatcgccggtcaggcgacagcacccgtcctccggctctcgcagctc
tggcaggattttcagcaggttcagatttcaatcgaccggctcggcgatatcctcaacacg
ccggtggagcgcactcccgccacgcgccttactcttcctccgccgaagggatcgatcgag
tttcgcaatgtgacgtttcgctacaggccgggcagtcaggatattctcaagaggattaac
ctgcacatcaggccgggcgaagtcgtcggcatcgtcggcgcgtcaggatccggaaaatcg
acgctcacgaaactcatccagcgcctctatctcgccagcgaaggccaggtcctgctcgac
gggatggatatatcgcagacggatccagcctggctccgtagtcatatcggcgtggtcctg
caggaaaatctgctgttcaacagaacgatccatgagaacatctcgcttgccaatccggca
ttgccgcgagcgcaagtcatgacggcggctagactttcgggggctgacgagttcatatct
aggctgcctcagggatatgacactctgatcgaggagcggggcgccaatctctcgggcggt
cagcgccagcgcatcgcgattgcccgggcgctcgccaccaatccgccgctcctgatcttc
gatgaagcgaccagtgcgctcgactacgagagcgagcgggtggtgcaggaaaacatgcgc
cacatcgtccaggggcgtaccgtcgtcattatcgcccatcgccttgccgcggtcagaaac
tgtaaccggatcattggcatggcggacgggcacattgttgagatgggcacgcacgaagag
ttgctccgcaaatcggatggtctttttgccaggctttgggctttgcaaaacgacgcgagg
gtctacggatga
DBGET
integrated database retrieval system
