Rhizobium etli bv. phaseoli IE4803: IE4803_CH03781
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Entry
IE4803_CH03781 CDS
T03667
Name
(GenBank) ATP-dependent DNA helicase Ku-type protein
KO
K10979
DNA end-binding protein Ku
Organism
rep
Rhizobium etli bv. phaseoli IE4803
Pathway
rep03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
IE4803_CH03781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rep03400
]
IE4803_CH03781
DNA repair and recombination proteins [BR:
rep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
IE4803_CH03781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AJC80937
LinkDB
All DBs
Position
3828103..3828999
Genome browser
AA seq
298 aa
AA seq
DB search
MAGPRANWKGYIRFGEVSCPVALYTAASSSERIAFNTLNRKTGNRVKREFIDSETGDPVE
RDDQVKGYEVENGQYVVLEPDEVAAAIPESDKTLKIEAFIPCSQIDTTYFDKPYYLAPDK
IGTDAFLLLRDGMKKEGVAAVAKTVLFRRLRTVLIRAHGKGLIASTLNFDYEVRSSEKAF
EEMPDLKIEGEMLQLAEHIIGTKKGSFDASTFDDRYEAAVAELVKAKIEGRTLPKRKAPA
ASKPSDLLQALRESAGLGTKESKPKRTAANANRGAGRQKAAKPAAKTKQASAPRRRAG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtccgagagcgaattggaagggctatatcagattcggggaggtgtcctgcccg
gtggcgctctatacggcggcctcctcgtcggaacgcatcgctttcaacacccttaatcgt
aaaaccggaaaccgggtcaaacgcgaattcatcgatagcgagaccggggatccggtcgag
cgcgacgaccaggtcaaaggctatgaggtcgagaacggccaatatgtcgtgcttgagccc
gacgaggttgcggcagcgatccctgagagcgacaagacattgaagatcgaggccttcatt
ccctgttcgcagatcgacaccacctactttgacaagccctattatctcgcccccgacaag
atcggcacggatgcctttctgctcctgcgggacggcatgaagaaggaaggggtcgcggca
gttgccaagaccgtgctctttcgtcggctgcgcaccgttctcatccgggcgcatggcaag
ggcctgatcgcctcgaccctgaacttcgactacgaggtccgctcgtccgaaaaggcgttt
gaagagatgccagacctgaagatcgaaggcgaaatgctccaactcgccgaacatatcatc
ggcaccaagaagggcagcttcgacgccagcaccttcgatgaccgctatgaggctgcagtc
gccgagctggtcaaggcgaagatcgagggccgcacgctgccgaagcggaaagcgccggcc
gcctccaagccgagcgacttgctgcaggccttgcgcgagagcgccggtctcggcacgaag
gaatcgaagccgaagcggacggcggcgaacgccaacagaggtgctggccgtcagaaggca
gccaagcctgccgcgaaaacgaagcaggcttcggcaccgaggcgccgggccggctga
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