Rhizobium etli CFN 42: RHE_CH00009
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Entry
RHE_CH00009 CDS
T00317
Name
(GenBank) probable lytic murein transglycosylase A protein
KO
K08304
peptidoglycan lytic transglycosylase A [EC:
4.2.2.29
]
Organism
ret
Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ret01011
]
RHE_CH00009
Enzymes [BR:
ret01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RHE_CH00009
Peptidoglycan biosynthesis and degradation proteins [BR:
ret01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RHE_CH00009
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Gene cluster
GFIT
Motif
Pfam:
MltA
3D
Motif
Other DBs
NCBI-ProteinID:
ABC88843
RhizoBase:
RHE_CH00009
UniProt:
Q2KE93
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Position
6164..7192
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AA seq
342 aa
AA seq
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MMRHCRRQITDVKPYRTGSLGLSAEDLLPLLMDAENFTPSSPAAARTFFETRCLPFLICR
KDGSSGFVTAFYEPEIEVSDRPDEIFRFPFYSRPNDLIDLDDGNRPAELDGSYAFGRLHD
DGLIGAYPDRREIDQGFLDGRGLEIAWAKSKVDVFFVHVQGAARLRYRDGRIGRITYAAK
AGHPFSAIGKLLIERGEIDRAEISMQSIRAWLARNPEQVDEVLWHNRSYIFFREAAVADP
EAGPIAAAKVPLLAGRSLAVDRLIHTFGFPFFIRAGSLTHLDDGRAFGRLMLALDTGSAI
VGPARGDIFTGSGDLAGERAGTVRHDADFVILIPKAAAGRFD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgacactgccggcggcagatcaccgacgtcaaaccctaccgcaccgggtcgctc
ggcctgagcgcggaggacctgcttccgcttcttatggacgctgaaaattttacgccgtcg
tcgccggcagcggcgcgcacctttttcgaaacgcgttgcctgccctttctgatctgccgc
aaggacggcagttccggtttcgtcaccgccttttacgagccggagatcgaggtatcggat
cggccggacgagattttccgttttcccttctatagccgtccgaacgatctgatcgatctc
gatgacggcaatcgcccggccgaattggatggatcctatgctttcggccggctgcatgac
gacggccttattggcgcctatccggatcgccgcgagatcgatcagggctttctcgacggc
cgcggcctcgaaatcgcctgggcgaaatcgaaggtcgatgtcttcttcgtccatgtgcag
ggcgccgcccggctgcgttatcgagatggccgtatcggccgcatcacctacgcggcgaag
gccggccatcccttctcggcgatcggcaaactgctgatcgagcgcggagaaatcgaccga
gccgagatttcgatgcagtcgatccgcgcctggctggcgcgcaatcccgagcaggtggac
gaagtgctatggcacaaccgctcctatattttcttccgggaagcggcggtcgccgatcct
gaggccggtccgatcgcggccgccaaggtgccgcttcttgccggccgttcgctggccgtc
gaccgcttgatccataccttcggctttccctttttcatccgcgccggcagcctcacgcat
ctcgatgatggccgcgccttcggccggctgatgctggcgctcgataccggctcggcgatc
gtcgggcctgcgcgcggcgatatcttcaccggttcgggggacttggccggagagcgcgct
ggcaccgtccgccacgatgccgatttcgtcatcctcatccccaaagccgccgccggacgt
ttcgactga
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